Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.771e-6■■■■□ 22.9
DDX52Q9Y2R4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.25■■□□□ 1.311e-6■■■■□ 22.9
DDX52Q9Y2R4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.581e-6■■■■□ 22.9
DDX52Q9Y2R4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.732e-6■■■■□ 22.8
DDX52Q9Y2R4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.4■■□□□ 1.662e-6■■■■□ 22.8
DDX52Q9Y2R4 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)16.13■□□□□ 0.172e-6■■■■□ 22.7
DDX52Q9Y2R4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.684e-7■■■■□ 22.7
DDX52Q9Y2R4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.234e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.71■■■□□ 2.194e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.15■■□□□ 1.784e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.79■■□□□ 1.724e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-217ENST00000566809 560 ntTSL 423.88■■□□□ 1.414e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.44e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-218ENST00000567087 550 ntTSL 421.99■■□□□ 1.114e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-223ENST00000569050 457 ntTSL 419.97■□□□□ 0.794e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.734e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-224ENST00000569857 1355 ntTSL 514.69□□□□□ -0.064e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-222ENST00000568883 1863 ntTSL 5 BASIC14.44□□□□□ -0.14e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.194e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-219ENST00000567118 2254 ntTSL 213.19□□□□□ -0.34e-7■■■■□ 22.7
DDX52Q9Y2R4 PKM-211ENST00000564276 753 ntTSL 1 (best)10.76□□□□□ -0.694e-7■■■■□ 22.7
DDX52Q9Y2R4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.264e-7■■■■□ 22.7
DDX52Q9Y2R4 PTMA-206ENST00000412128 863 ntTSL 329.23■■■□□ 2.271e-7■■■■□ 22.7
DDX52Q9Y2R4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.43■■□□□ 1.821e-7■■■■□ 22.7
DDX52Q9Y2R4 PTMA-207ENST00000440384 222 ntTSL 322.63■■□□□ 1.211e-7■■■■□ 22.7
DDX52Q9Y2R4 TCF3-210ENST00000587235 986 ntTSL 529.98■■■□□ 2.393e-6■■■■□ 22.7
DDX52Q9Y2R4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.17■■□□□ 1.463e-6■■■■□ 22.7
DDX52Q9Y2R4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.75■□□□□ 0.593e-6■■■■□ 22.7
DDX52Q9Y2R4 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.2□□□□□ -0.143e-6■■■■□ 22.7
DDX52Q9Y2R4 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.153e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.75■■□□□ 1.555e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-203ENST00000406835 738 ntTSL 522.66■■□□□ 1.225e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-204ENST00000435721 672 ntTSL 322.66■■□□□ 1.225e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 15e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-205ENST00000441271 647 ntTSL 520.5■□□□□ 0.875e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-207ENST00000444776 594 ntTSL 420.28■□□□□ 0.845e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.45■□□□□ 0.75e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-212ENST00000478754 2932 ntTSL 518.65■□□□□ 0.585e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-208ENST00000455162 847 ntTSL 512.48□□□□□ -0.415e-6■■■■□ 22.7
DDX52Q9Y2R4 EIPR1-210ENST00000463662 757 ntTSL 310.75□□□□□ -0.695e-6■■■■□ 22.7
DDX52Q9Y2R4 EHMT1-246ENST00000637748 2006 ntTSL 523.46■■□□□ 1.356e-6■■■■□ 22.6
DDX52Q9Y2R4 EHMT1-217ENST00000494249 2038 ntTSL 1 (best)22.84■■□□□ 1.256e-6■■■■□ 22.6
DDX52Q9Y2R4 EHMT1-208ENST00000475564 2782 ntTSL 1 (best)19.04■□□□□ 0.646e-6■■■■□ 22.6
DDX52Q9Y2R4 OAZ1-203ENST00000586054 2832 nt22.69■■□□□ 1.221e-24■■■■□ 22.6
DDX52Q9Y2R4 CBFA2T3-204ENST00000563640 664 ntTSL 218.64■□□□□ 0.571e-6■■■■□ 22.6
DDX52Q9Y2R4 NADK-203ENST00000342348 1722 ntAPPRIS ALT2 TSL 219.45■□□□□ 0.73e-6■■■■□ 22.6
DDX52Q9Y2R4 TBCD-214ENST00000574801 586 ntTSL 415.77■□□□□ 0.123e-6■■■■□ 22.6
DDX52Q9Y2R4 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.042e-6■■■■□ 22.6
DDX52Q9Y2R4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.111e-6■■■■□ 22.5
DDX52Q9Y2R4 CD81-217ENST00000533417 444 ntTSL 320.43■□□□□ 0.865e-6■■■■□ 22.4
DDX52Q9Y2R4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.232e-6■■■■□ 22.4
DDX52Q9Y2R4 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 328.26■■■□□ 2.113e-6■■■■□ 22.4
DDX52Q9Y2R4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.353e-6■■■■□ 22.4
DDX52Q9Y2R4 KLHL24-212ENST00000481126 389 ntTSL 224.94■■□□□ 1.583e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-207ENST00000484408 682 ntTSL 524.54■■□□□ 1.525e-7■■■■□ 22.4
DDX52Q9Y2R4 MAD1L1-205ENST00000421113 564 ntTSL 422.92■■□□□ 1.265e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.215e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.66■■□□□ 1.065e-7■■■■□ 22.4
DDX52Q9Y2R4 RAF1-203ENST00000423275 2354 ntTSL 221.4■■□□□ 1.025e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.875e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.845e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-228ENST00000485168 737 ntTSL 319.48■□□□□ 0.715e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-208ENST00000489742 522 ntTSL 318.99■□□□□ 0.635e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-237ENST00000495999 555 ntTSL 318.74■□□□□ 0.595e-7■■■■□ 22.4
DDX52Q9Y2R4 MAD1L1-210ENST00000444373 535 ntTSL 418.56■□□□□ 0.565e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-216ENST00000464858 633 ntTSL 318.34■□□□□ 0.535e-7■■■■□ 22.4
DDX52Q9Y2R4 RAF1-202ENST00000416093 962 ntTSL 217.67■□□□□ 0.425e-7■■■■□ 22.4
DDX52Q9Y2R4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.6■□□□□ 0.415e-7■■■■□ 22.4
DDX52Q9Y2R4 C17orf99-205ENST00000586999 379 ntTSL 217.11■□□□□ 0.335e-7■■■■□ 22.4
DDX52Q9Y2R4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.05■□□□□ 0.325e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-219ENST00000470040 2548 ntTSL 216.94■□□□□ 0.35e-7■■■■□ 22.4
DDX52Q9Y2R4 FAM60A-204ENST00000536836 1734 ntTSL 216.78■□□□□ 0.285e-7■■■■□ 22.4
DDX52Q9Y2R4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.65■□□□□ 0.265e-7■■■■□ 22.4
DDX52Q9Y2R4 MAD1L1-209ENST00000438959 839 ntTSL 316.44■□□□□ 0.225e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-223ENST00000478725 414 ntTSL 316.27■□□□□ 0.25e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-203ENST00000432899 1004 ntTSL 516■□□□□ 0.155e-7■■■■□ 22.4
DDX52Q9Y2R4 C17orf99-206ENST00000591995 568 ntAPPRIS ALT2 TSL 415.89■□□□□ 0.135e-7■■■■□ 22.4
DDX52Q9Y2R4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.115e-7■■■■□ 22.4
DDX52Q9Y2R4 GUK1-232ENST00000486668 738 ntTSL 315.29■□□□□ 0.045e-7■■■■□ 22.4
DDX52Q9Y2R4 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC14.47□□□□□ -0.095e-7■■■■□ 22.4
DDX52Q9Y2R4 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.235e-7■■■■□ 22.4
DDX52Q9Y2R4 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC13.53□□□□□ -0.245e-7■■■■□ 22.4
DDX52Q9Y2R4 STPG4-206ENST00000422269 983 ntTSL 212.83□□□□□ -0.365e-7■■■■□ 22.4
DDX52Q9Y2R4 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.45e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-202ENST00000409563 770 ntTSL 5 BASIC11.45□□□□□ -0.585e-7■■■■□ 22.4
DDX52Q9Y2R4 FAM60A-205ENST00000539004 459 ntTSL 54.79□□□□□ -1.645e-7■■■■□ 22.4
DDX52Q9Y2R4 CALM2-204ENST00000456319 703 ntTSL 24.59□□□□□ -1.675e-7■■■■□ 22.4
DDX52Q9Y2R4 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.521e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.12□□□□□ -1.111e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)7.96□□□□□ -1.141e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.21e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-218ENST00000475653 909 ntTSL 27.19□□□□□ -1.261e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-204ENST00000429589 1005 ntTSL 57.09□□□□□ -1.271e-323■■■■□ 22.3
DDX52Q9Y2R4 SNORA81-201ENST00000408493 178 ntBASIC6.79□□□□□ -1.321e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-202ENST00000425053 1977 ntTSL 56.57□□□□□ -1.361e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-222ENST00000492144 993 ntTSL 26.26□□□□□ -1.411e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-217ENST00000475409 802 ntTSL 26.25□□□□□ -1.411e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-216ENST00000468362 1356 ntTSL 25.48□□□□□ -1.531e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-226ENST00000497177 849 ntTSL 55.17□□□□□ -1.581e-323■■■■□ 22.3
DDX52Q9Y2R4 EIF4A2-219ENST00000485101 5327 ntTSL 54.69□□□□□ -1.661e-323■■■■□ 22.3
Retrieved 100 of 4,483 protein–RNA pairs in 137.6 ms