RNA–Protein interactions for RNA: ENST00000417954.5

SLC19A1-203, Transcript of solute carrier family 19 member 1, humanhuman

TSL 1 (best)

Gene SLC19A1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-203ENST00000417954 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
SLC19A1-203ENST00000417954 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
SLC19A1-203ENST00000417954 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
SLC19A1-203ENST00000417954 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
SLC19A1-203ENST00000417954 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
SLC19A1-203ENST00000417954 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
SLC19A1-203ENST00000417954 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
SLC19A1-203ENST00000417954 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.44
SLC19A1-203ENST00000417954 HRCP23327 699 aa24.03■■□□□ 1.44
SLC19A1-203ENST00000417954 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
SLC19A1-203ENST00000417954 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
SLC19A1-203ENST00000417954 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
SLC19A1-203ENST00000417954 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
SLC19A1-203ENST00000417954 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.34
SLC19A1-203ENST00000417954 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
SLC19A1-203ENST00000417954 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
SLC19A1-203ENST00000417954 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
SLC19A1-203ENST00000417954 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
SLC19A1-203ENST00000417954 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
SLC19A1-203ENST00000417954 ABCC9O60706 1549 aa23.04■■□□□ 1.28
SLC19A1-203ENST00000417954 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
SLC19A1-203ENST00000417954 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
SLC19A1-203ENST00000417954 MYT1Q01538 1121 aa22.84■■□□□ 1.25
SLC19A1-203ENST00000417954 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
SLC19A1-203ENST00000417954 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
SLC19A1-203ENST00000417954 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
SLC19A1-203ENST00000417954 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
SLC19A1-203ENST00000417954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
SLC19A1-203ENST00000417954 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
SLC19A1-203ENST00000417954 NACADO15069 1562 aa22.39■■□□□ 1.18
SLC19A1-203ENST00000417954 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
SLC19A1-203ENST00000417954 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
SLC19A1-203ENST00000417954 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
SLC19A1-203ENST00000417954 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
SLC19A1-203ENST00000417954 WIZO95785 1651 aa22.25■■□□□ 1.15
SLC19A1-203ENST00000417954 NEUROD1Q13562 356 aa22.23■■□□□ 1.15
SLC19A1-203ENST00000417954 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
SLC19A1-203ENST00000417954 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
SLC19A1-203ENST00000417954 ACIN1Q9UKV3 1341 aaKnown RBP22.16■■□□□ 1.14
SLC19A1-203ENST00000417954 CENPBP07199 599 aaPredicted RBP22.12■■□□□ 1.13
SLC19A1-203ENST00000417954 DIEXFQ68CQ4 756 aaKnown RBP22.06■■□□□ 1.12
SLC19A1-203ENST00000417954 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
SLC19A1-203ENST00000417954 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
SLC19A1-203ENST00000417954 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
SLC19A1-203ENST00000417954 SOGA1O94964 1423 aa21.94■■□□□ 1.1
SLC19A1-203ENST00000417954 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
SLC19A1-203ENST00000417954 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
SLC19A1-203ENST00000417954 APLP2Q06481 763 aa21.88■■□□□ 1.09
SLC19A1-203ENST00000417954 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
SLC19A1-203ENST00000417954 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
SLC19A1-203ENST00000417954 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
SLC19A1-203ENST00000417954 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
SLC19A1-203ENST00000417954 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
SLC19A1-203ENST00000417954 BCL11AQ9H165 835 aa21.74■■□□□ 1.07
SLC19A1-203ENST00000417954 ZNF316A6NFI3 1004 aaPredicted RBP21.69■■□□□ 1.06
SLC19A1-203ENST00000417954 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
SLC19A1-203ENST00000417954 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
SLC19A1-203ENST00000417954 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
SLC19A1-203ENST00000417954 MIER1Q8N108 512 aa21.64■■□□□ 1.05
SLC19A1-203ENST00000417954 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
SLC19A1-203ENST00000417954 EEA1Q15075 1411 aa21.53■■□□□ 1.04
SLC19A1-203ENST00000417954 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
SLC19A1-203ENST00000417954 CLIP1P30622 1438 aa21.46■■□□□ 1.03
SLC19A1-203ENST00000417954 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
SLC19A1-203ENST00000417954 ITGAEP38570 1179 aa21.42■■□□□ 1.02
SLC19A1-203ENST00000417954 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
SLC19A1-203ENST00000417954 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
SLC19A1-203ENST00000417954 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
SLC19A1-203ENST00000417954 BICRAQ9NZM4 1560 aa21.33■■□□□ 1
SLC19A1-203ENST00000417954 SYNJ1O43426 1573 aa21.32■■□□□ 1
SLC19A1-203ENST00000417954 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
SLC19A1-203ENST00000417954 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
SLC19A1-203ENST00000417954 ANP32EQ9BTT0 268 aa21.22■□□□□ 0.99
SLC19A1-203ENST00000417954 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
SLC19A1-203ENST00000417954 BCANQ96GW7 911 aa21.17■□□□□ 0.98
SLC19A1-203ENST00000417954 PRKCSHP14314 528 aaPredicted RBP21.16■□□□□ 0.98
SLC19A1-203ENST00000417954 KIF21BO75037 1637 aa21.12■□□□□ 0.97
SLC19A1-203ENST00000417954 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
SLC19A1-203ENST00000417954 DHX57Q6P158 1386 aaKnown RBP21.08■□□□□ 0.96
SLC19A1-203ENST00000417954 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
SLC19A1-203ENST00000417954 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
SLC19A1-203ENST00000417954 FAM50AQ14320 339 aaKnown RBP21.01■□□□□ 0.95
SLC19A1-203ENST00000417954 KIF27Q86VH2 1401 aa21.01■□□□□ 0.95
SLC19A1-203ENST00000417954 SUPT16HQ9Y5B9 1047 aaKnown RBP20.99■□□□□ 0.95
SLC19A1-203ENST00000417954 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
SLC19A1-203ENST00000417954 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SLC19A1-203ENST00000417954 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
SLC19A1-203ENST00000417954 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
SLC19A1-203ENST00000417954 CUX2O14529 1486 aa20.86■□□□□ 0.93
SLC19A1-203ENST00000417954 TSHZ2Q9NRE2 1034 aa20.85■□□□□ 0.93
SLC19A1-203ENST00000417954 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
SLC19A1-203ENST00000417954 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
SLC19A1-203ENST00000417954 CUX1P39880 1505 aa20.81■□□□□ 0.92
SLC19A1-203ENST00000417954 SIN3AQ96ST3 1273 aa20.8■□□□□ 0.92
SLC19A1-203ENST00000417954 CCNB3Q8WWL7 1395 aa20.79■□□□□ 0.92
SLC19A1-203ENST00000417954 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
SLC19A1-203ENST00000417954 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
SLC19A1-203ENST00000417954 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
SLC19A1-203ENST00000417954 RAB3GAP2Q9H2M9 1393 aa20.74■□□□□ 0.91
SLC19A1-203ENST00000417954 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms