RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-222ENST00000568883 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
PKM-222ENST00000568883 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
PKM-222ENST00000568883 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
PKM-222ENST00000568883 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
PKM-222ENST00000568883 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
PKM-222ENST00000568883 SUPT5HO00267 1087 aaKnown RBP21.83■■□□□ 1.08
PKM-222ENST00000568883 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
PKM-222ENST00000568883 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
PKM-222ENST00000568883 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
PKM-222ENST00000568883 ABCC9O60706 1549 aa21.14■□□□□ 0.97
PKM-222ENST00000568883 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
PKM-222ENST00000568883 NACADO15069 1562 aa20.98■□□□□ 0.95
PKM-222ENST00000568883 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
PKM-222ENST00000568883 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
PKM-222ENST00000568883 HRCP23327 699 aa20.54■□□□□ 0.88
PKM-222ENST00000568883 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
PKM-222ENST00000568883 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
PKM-222ENST00000568883 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
PKM-222ENST00000568883 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
PKM-222ENST00000568883 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
PKM-222ENST00000568883 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
PKM-222ENST00000568883 WIZO95785 1651 aa20.33■□□□□ 0.85
PKM-222ENST00000568883 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
PKM-222ENST00000568883 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
PKM-222ENST00000568883 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
PKM-222ENST00000568883 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
PKM-222ENST00000568883 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
PKM-222ENST00000568883 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
PKM-222ENST00000568883 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
PKM-222ENST00000568883 SMARCA2P51531 1590 aa20■□□□□ 0.79
PKM-222ENST00000568883 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
PKM-222ENST00000568883 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
PKM-222ENST00000568883 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
PKM-222ENST00000568883 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
PKM-222ENST00000568883 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
PKM-222ENST00000568883 EEA1Q15075 1411 aa19.85■□□□□ 0.77
PKM-222ENST00000568883 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
PKM-222ENST00000568883 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.763e-11■□□□□ 10.4
PKM-222ENST00000568883 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
PKM-222ENST00000568883 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.741e-7■■■■□ 20.9
PKM-222ENST00000568883 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
PKM-222ENST00000568883 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
PKM-222ENST00000568883 SOGA1O94964 1423 aa19.65■□□□□ 0.74
PKM-222ENST00000568883 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
PKM-222ENST00000568883 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.74
PKM-222ENST00000568883 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
PKM-222ENST00000568883 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
PKM-222ENST00000568883 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
PKM-222ENST00000568883 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
PKM-222ENST00000568883 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
PKM-222ENST00000568883 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
PKM-222ENST00000568883 KIF21BO75037 1637 aa19.47■□□□□ 0.71
PKM-222ENST00000568883 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
PKM-222ENST00000568883 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
PKM-222ENST00000568883 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
PKM-222ENST00000568883 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
PKM-222ENST00000568883 CLIP1P30622 1438 aa19.31■□□□□ 0.68
PKM-222ENST00000568883 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
PKM-222ENST00000568883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
PKM-222ENST00000568883 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
PKM-222ENST00000568883 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
PKM-222ENST00000568883 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
PKM-222ENST00000568883 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
PKM-222ENST00000568883 APLP2Q06481 763 aa19.19■□□□□ 0.66
PKM-222ENST00000568883 CFTRP13569 1480 aa19.17■□□□□ 0.66
PKM-222ENST00000568883 PRXQ9BXM0 1461 aa19.14■□□□□ 0.66
PKM-222ENST00000568883 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
PKM-222ENST00000568883 CUX1P39880 1505 aa19.11■□□□□ 0.65
PKM-222ENST00000568883 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
PKM-222ENST00000568883 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
PKM-222ENST00000568883 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
PKM-222ENST00000568883 DIEXFQ68CQ4 756 aaKnown RBP18.94■□□□□ 0.62
PKM-222ENST00000568883 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
PKM-222ENST00000568883 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
PKM-222ENST00000568883 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
PKM-222ENST00000568883 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
PKM-222ENST00000568883 CUX2O14529 1486 aa18.86■□□□□ 0.61
PKM-222ENST00000568883 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
PKM-222ENST00000568883 IGF1RP08069 1367 aa18.82■□□□□ 0.6
PKM-222ENST00000568883 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
PKM-222ENST00000568883 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
PKM-222ENST00000568883 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
PKM-222ENST00000568883 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
PKM-222ENST00000568883 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
PKM-222ENST00000568883 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
PKM-222ENST00000568883 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
PKM-222ENST00000568883 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
PKM-222ENST00000568883 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
PKM-222ENST00000568883 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
PKM-222ENST00000568883 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
PKM-222ENST00000568883 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.58
PKM-222ENST00000568883 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
PKM-222ENST00000568883 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
PKM-222ENST00000568883 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
PKM-222ENST00000568883 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
PKM-222ENST00000568883 TIAM1Q13009 1591 aa18.64■□□□□ 0.58
PKM-222ENST00000568883 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
PKM-222ENST00000568883 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
PKM-222ENST00000568883 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
PKM-222ENST00000568883 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms