RNA–Protein interactions for RNA: ENST00000569857.5

PKM-224, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5

Gene PKM, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-224ENST00000569857 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
PKM-224ENST00000569857 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
PKM-224ENST00000569857 ABCC9O60706 1549 aa25.52■■□□□ 1.68
PKM-224ENST00000569857 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
PKM-224ENST00000569857 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
PKM-224ENST00000569857 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
PKM-224ENST00000569857 NACADO15069 1562 aa24.5■■□□□ 1.51
PKM-224ENST00000569857 MYO15BQ96JP2 1530 aa24.33■■□□□ 1.49
PKM-224ENST00000569857 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
PKM-224ENST00000569857 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
PKM-224ENST00000569857 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
PKM-224ENST00000569857 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.43
PKM-224ENST00000569857 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
PKM-224ENST00000569857 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
PKM-224ENST00000569857 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.31
PKM-224ENST00000569857 EIF4G1Q04637 1599 aaKnown RBP23.13■■□□□ 1.29
PKM-224ENST00000569857 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
PKM-224ENST00000569857 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
PKM-224ENST00000569857 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
PKM-224ENST00000569857 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
PKM-224ENST00000569857 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
PKM-224ENST00000569857 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
PKM-224ENST00000569857 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
PKM-224ENST00000569857 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
PKM-224ENST00000569857 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
PKM-224ENST00000569857 WIZO95785 1651 aa22.58■■□□□ 1.21
PKM-224ENST00000569857 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
PKM-224ENST00000569857 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
PKM-224ENST00000569857 HMGXB3Q12766 1538 aa22.49■■□□□ 1.19
PKM-224ENST00000569857 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
PKM-224ENST00000569857 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
PKM-224ENST00000569857 NESP48681 1621 aa22.12■■□□□ 1.13
PKM-224ENST00000569857 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
PKM-224ENST00000569857 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
PKM-224ENST00000569857 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
PKM-224ENST00000569857 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
PKM-224ENST00000569857 CFTRP13569 1480 aa21.89■■□□□ 1.09
PKM-224ENST00000569857 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
PKM-224ENST00000569857 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
PKM-224ENST00000569857 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
PKM-224ENST00000569857 CEP164Q9UPV0 1460 aa21.73■■□□□ 1.07
PKM-224ENST00000569857 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
PKM-224ENST00000569857 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
PKM-224ENST00000569857 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
PKM-224ENST00000569857 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
PKM-224ENST00000569857 CUX2O14529 1486 aa21.54■■□□□ 1.04
PKM-224ENST00000569857 WDR62O43379 1518 aa21.51■■□□□ 1.03
PKM-224ENST00000569857 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
PKM-224ENST00000569857 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
PKM-224ENST00000569857 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
PKM-224ENST00000569857 CUX1P39880 1505 aa21.36■■□□□ 1.01
PKM-224ENST00000569857 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 11e-7■■■■□ 20.9
PKM-224ENST00000569857 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
PKM-224ENST00000569857 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
PKM-224ENST00000569857 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
PKM-224ENST00000569857 SOGA1O94964 1423 aa21.25■□□□□ 0.99
PKM-224ENST00000569857 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
PKM-224ENST00000569857 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
PKM-224ENST00000569857 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
PKM-224ENST00000569857 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
PKM-224ENST00000569857 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
PKM-224ENST00000569857 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
PKM-224ENST00000569857 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
PKM-224ENST00000569857 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.971e-7■■■■■ 27.6
PKM-224ENST00000569857 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
PKM-224ENST00000569857 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
PKM-224ENST00000569857 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
PKM-224ENST00000569857 WDR97A6NE52 1622 aa21■□□□□ 0.95
PKM-224ENST00000569857 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
PKM-224ENST00000569857 FBLN2P98095 1184 aa20.96■□□□□ 0.95
PKM-224ENST00000569857 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
PKM-224ENST00000569857 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
PKM-224ENST00000569857 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
PKM-224ENST00000569857 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
PKM-224ENST00000569857 PBRM1Q86U86 1689 aa20.88■□□□□ 0.93
PKM-224ENST00000569857 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
PKM-224ENST00000569857 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
PKM-224ENST00000569857 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
PKM-224ENST00000569857 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
PKM-224ENST00000569857 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
PKM-224ENST00000569857 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
PKM-224ENST00000569857 CHD1O14646 1710 aa20.77■□□□□ 0.92
PKM-224ENST00000569857 IGF1RP08069 1367 aa20.77■□□□□ 0.91
PKM-224ENST00000569857 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
PKM-224ENST00000569857 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
PKM-224ENST00000569857 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
PKM-224ENST00000569857 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
PKM-224ENST00000569857 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
PKM-224ENST00000569857 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
PKM-224ENST00000569857 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
PKM-224ENST00000569857 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
PKM-224ENST00000569857 CUL7Q14999 1698 aa20.61■□□□□ 0.89
PKM-224ENST00000569857 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
PKM-224ENST00000569857 EEA1Q15075 1411 aa20.54■□□□□ 0.88
PKM-224ENST00000569857 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
PKM-224ENST00000569857 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
PKM-224ENST00000569857 NUP160Q12769 1436 aa20.52■□□□□ 0.88
PKM-224ENST00000569857 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
PKM-224ENST00000569857 PRXQ9BXM0 1461 aa20.46■□□□□ 0.87
PKM-224ENST00000569857 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms