RNA–Protein interactions for RNA: ENST00000536836.1

FAM60A-204, Transcript of Protein FAM60A, humanhuman

TSL 2

Gene FAM60A, Length 1,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-204ENST00000536836 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.05
FAM60A-204ENST00000536836 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
FAM60A-204ENST00000536836 ABCC9O60706 1549 aa29.63■■■□□ 2.33
FAM60A-204ENST00000536836 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
FAM60A-204ENST00000536836 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.14
FAM60A-204ENST00000536836 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
FAM60A-204ENST00000536836 NACADO15069 1562 aa28.32■■■□□ 2.12
FAM60A-204ENST00000536836 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
FAM60A-204ENST00000536836 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
FAM60A-204ENST00000536836 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
FAM60A-204ENST00000536836 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
FAM60A-204ENST00000536836 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
FAM60A-204ENST00000536836 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
FAM60A-204ENST00000536836 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
FAM60A-204ENST00000536836 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
FAM60A-204ENST00000536836 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
FAM60A-204ENST00000536836 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
FAM60A-204ENST00000536836 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
FAM60A-204ENST00000536836 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
FAM60A-204ENST00000536836 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
FAM60A-204ENST00000536836 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
FAM60A-204ENST00000536836 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
FAM60A-204ENST00000536836 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
FAM60A-204ENST00000536836 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
FAM60A-204ENST00000536836 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
FAM60A-204ENST00000536836 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
FAM60A-204ENST00000536836 WIZO95785 1651 aa26.04■■□□□ 1.76
FAM60A-204ENST00000536836 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
FAM60A-204ENST00000536836 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
FAM60A-204ENST00000536836 NESP48681 1621 aa25.7■■□□□ 1.7
FAM60A-204ENST00000536836 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
FAM60A-204ENST00000536836 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
FAM60A-204ENST00000536836 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
FAM60A-204ENST00000536836 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
FAM60A-204ENST00000536836 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
FAM60A-204ENST00000536836 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
FAM60A-204ENST00000536836 CFTRP13569 1480 aa25.33■■□□□ 1.64
FAM60A-204ENST00000536836 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
FAM60A-204ENST00000536836 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
FAM60A-204ENST00000536836 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
FAM60A-204ENST00000536836 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
FAM60A-204ENST00000536836 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
FAM60A-204ENST00000536836 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
FAM60A-204ENST00000536836 CUX2O14529 1486 aa25.04■■□□□ 1.6
FAM60A-204ENST00000536836 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
FAM60A-204ENST00000536836 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
FAM60A-204ENST00000536836 WDR62O43379 1518 aa24.96■■□□□ 1.59
FAM60A-204ENST00000536836 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
FAM60A-204ENST00000536836 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
FAM60A-204ENST00000536836 CUX1P39880 1505 aa24.68■■□□□ 1.54
FAM60A-204ENST00000536836 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
FAM60A-204ENST00000536836 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
FAM60A-204ENST00000536836 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
FAM60A-204ENST00000536836 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
FAM60A-204ENST00000536836 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
FAM60A-204ENST00000536836 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
FAM60A-204ENST00000536836 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
FAM60A-204ENST00000536836 SOGA1O94964 1423 aa24.52■■□□□ 1.52
FAM60A-204ENST00000536836 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
FAM60A-204ENST00000536836 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
FAM60A-204ENST00000536836 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.511e-6■■■■□ 23.1
FAM60A-204ENST00000536836 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.51
FAM60A-204ENST00000536836 TOP2BQ02880 1626 aa24.41■■□□□ 1.5
FAM60A-204ENST00000536836 EIF4G3O43432 1585 aaKnown RBP24.39■■□□□ 1.49
FAM60A-204ENST00000536836 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
FAM60A-204ENST00000536836 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
FAM60A-204ENST00000536836 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
FAM60A-204ENST00000536836 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
FAM60A-204ENST00000536836 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
FAM60A-204ENST00000536836 FBLN2P98095 1184 aa24.19■■□□□ 1.46
FAM60A-204ENST00000536836 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
FAM60A-204ENST00000536836 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
FAM60A-204ENST00000536836 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
FAM60A-204ENST00000536836 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
FAM60A-204ENST00000536836 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
FAM60A-204ENST00000536836 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
FAM60A-204ENST00000536836 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
FAM60A-204ENST00000536836 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
FAM60A-204ENST00000536836 CHD1O14646 1710 aa24.04■■□□□ 1.44
FAM60A-204ENST00000536836 SYNJ2O15056 1496 aa24■■□□□ 1.43
FAM60A-204ENST00000536836 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
FAM60A-204ENST00000536836 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
FAM60A-204ENST00000536836 IGF1RP08069 1367 aa23.95■■□□□ 1.42
FAM60A-204ENST00000536836 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.42
FAM60A-204ENST00000536836 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
FAM60A-204ENST00000536836 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
FAM60A-204ENST00000536836 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
FAM60A-204ENST00000536836 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
FAM60A-204ENST00000536836 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
FAM60A-204ENST00000536836 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
FAM60A-204ENST00000536836 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
FAM60A-204ENST00000536836 NUP160Q12769 1436 aa23.75■■□□□ 1.39
FAM60A-204ENST00000536836 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
FAM60A-204ENST00000536836 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
FAM60A-204ENST00000536836 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
FAM60A-204ENST00000536836 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
FAM60A-204ENST00000536836 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
FAM60A-204ENST00000536836 CUL7Q14999 1698 aa23.71■■□□□ 1.39
FAM60A-204ENST00000536836 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
FAM60A-204ENST00000536836 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms