Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.85■■■□□ 2.37
ZC3H4Q9UPT8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.85■■■□□ 2.37
ZC3H4Q9UPT8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.84■■■□□ 2.37
ZC3H4Q9UPT8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.84■■■□□ 2.37
ZC3H4Q9UPT8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.84■■■□□ 2.37
ZC3H4Q9UPT8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.84■■■□□ 2.37
ZC3H4Q9UPT8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZC3H4Q9UPT8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
ZC3H4Q9UPT8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZC3H4Q9UPT8 RARRES2P6-201ENST00000567333 442 ntBASIC29.82■■■□□ 2.36
ZC3H4Q9UPT8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZC3H4Q9UPT8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
ZC3H4Q9UPT8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZC3H4Q9UPT8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZC3H4Q9UPT8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
ZC3H4Q9UPT8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZC3H4Q9UPT8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZC3H4Q9UPT8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZC3H4Q9UPT8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 AL117332.1-201ENST00000622628 974 ntBASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ZC3H4Q9UPT8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 KRT18P10-201ENST00000388836 1287 ntBASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 AC092028.1-203ENST00000608262 953 ntBASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.77■■■□□ 2.36
ZC3H4Q9UPT8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.76■■■□□ 2.36
ZC3H4Q9UPT8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.76■■■□□ 2.36
ZC3H4Q9UPT8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.76■■■□□ 2.36
ZC3H4Q9UPT8 MIR3621-201ENST00000580529 85 ntBASIC29.76■■■□□ 2.36
ZC3H4Q9UPT8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
ZC3H4Q9UPT8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ZC3H4Q9UPT8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
ZC3H4Q9UPT8 AC096631.2-201ENST00000436136 790 ntBASIC29.75■■■□□ 2.35
ZC3H4Q9UPT8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.75■■■□□ 2.35
ZC3H4Q9UPT8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ZC3H4Q9UPT8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.75■■■□□ 2.35
ZC3H4Q9UPT8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.74■■■□□ 2.35
ZC3H4Q9UPT8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.74■■■□□ 2.35
ZC3H4Q9UPT8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.73■■■□□ 2.35
ZC3H4Q9UPT8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.73■■■□□ 2.35
ZC3H4Q9UPT8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ZC3H4Q9UPT8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.72■■■□□ 2.35
ZC3H4Q9UPT8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.71■■■□□ 2.35
ZC3H4Q9UPT8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ZC3H4Q9UPT8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ZC3H4Q9UPT8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.71■■■□□ 2.35
ZC3H4Q9UPT8 AC104564.3-201ENST00000582367 638 ntBASIC29.71■■■□□ 2.35
ZC3H4Q9UPT8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ZC3H4Q9UPT8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.7■■■□□ 2.35
ZC3H4Q9UPT8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ZC3H4Q9UPT8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H4Q9UPT8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ZC3H4Q9UPT8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ZC3H4Q9UPT8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.67■■■□□ 2.34
ZC3H4Q9UPT8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.67■■■□□ 2.34
ZC3H4Q9UPT8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ZC3H4Q9UPT8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ZC3H4Q9UPT8 AC026271.2-201ENST00000428091 497 ntBASIC29.66■■■□□ 2.34
ZC3H4Q9UPT8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 MIR6724-1-201ENST00000616420 92 ntBASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 MIR6724-2-201ENST00000616483 92 ntBASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 MIR6724-4-201ENST00000617390 92 ntBASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 MIR6724-3-201ENST00000622482 92 ntBASIC29.65■■■□□ 2.34
ZC3H4Q9UPT8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ZC3H4Q9UPT8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ZC3H4Q9UPT8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.64■■■□□ 2.34
ZC3H4Q9UPT8 ZNRF2P3-201ENST00000424200 374 ntBASIC29.64■■■□□ 2.34
ZC3H4Q9UPT8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ZC3H4Q9UPT8 AP002414.2-202ENST00000590929 1450 ntBASIC29.63■■■□□ 2.33
ZC3H4Q9UPT8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ZC3H4Q9UPT8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ZC3H4Q9UPT8 WHAMMP3-201ENST00000611636 1609 ntBASIC29.63■■■□□ 2.33
ZC3H4Q9UPT8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms