Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RAP2CP1-202ENST00000605179 643 ntBASIC25.91■■□□□ 1.74
CISHQ9NSE2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.9■■□□□ 1.74
CISHQ9NSE2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CISHQ9NSE2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CISHQ9NSE2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
CISHQ9NSE2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CISHQ9NSE2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CISHQ9NSE2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CISHQ9NSE2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.9■■□□□ 1.74
CISHQ9NSE2 AC009831.1-201ENST00000580420 1582 ntBASIC25.9■■□□□ 1.74
CISHQ9NSE2 ERN1-208ENST00000606895 2068 ntBASIC25.89■■□□□ 1.74
CISHQ9NSE2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CISHQ9NSE2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CISHQ9NSE2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CISHQ9NSE2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.89■■□□□ 1.74
CISHQ9NSE2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CISHQ9NSE2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CISHQ9NSE2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CISHQ9NSE2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.88■■□□□ 1.73
CISHQ9NSE2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CISHQ9NSE2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CISHQ9NSE2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CISHQ9NSE2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CISHQ9NSE2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CISHQ9NSE2 AC133552.2-201ENST00000619106 1032 ntBASIC25.87■■□□□ 1.73
CISHQ9NSE2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CISHQ9NSE2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.87■■□□□ 1.73
CISHQ9NSE2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CISHQ9NSE2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CISHQ9NSE2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CISHQ9NSE2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CISHQ9NSE2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CISHQ9NSE2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.86■■□□□ 1.73
CISHQ9NSE2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
CISHQ9NSE2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.86■■□□□ 1.73
CISHQ9NSE2 AC145676.1-201ENST00000514988 2004 ntBASIC25.85■■□□□ 1.73
CISHQ9NSE2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CISHQ9NSE2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CISHQ9NSE2 ABHD17AP5-201ENST00000580133 923 ntBASIC25.85■■□□□ 1.73
CISHQ9NSE2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CISHQ9NSE2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CISHQ9NSE2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CISHQ9NSE2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.84■■□□□ 1.73
CISHQ9NSE2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.84■■□□□ 1.73
CISHQ9NSE2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CISHQ9NSE2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.83■■□□□ 1.73
CISHQ9NSE2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CISHQ9NSE2 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.83■■□□□ 1.73
CISHQ9NSE2 U85056.1-201ENST00000616429 682 ntBASIC25.83■■□□□ 1.73
CISHQ9NSE2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CISHQ9NSE2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CISHQ9NSE2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CISHQ9NSE2 AC010501.1-201ENST00000606270 1962 ntBASIC25.82■■□□□ 1.72
CISHQ9NSE2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CISHQ9NSE2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.82■■□□□ 1.72
CISHQ9NSE2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CISHQ9NSE2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CISHQ9NSE2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CISHQ9NSE2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CISHQ9NSE2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CISHQ9NSE2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.8■■□□□ 1.72
CISHQ9NSE2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.8■■□□□ 1.72
CISHQ9NSE2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CISHQ9NSE2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CISHQ9NSE2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CISHQ9NSE2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CISHQ9NSE2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CISHQ9NSE2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CISHQ9NSE2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CISHQ9NSE2 AL592293.1-201ENST00000502889 1188 ntBASIC25.78■■□□□ 1.72
CISHQ9NSE2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CISHQ9NSE2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CISHQ9NSE2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CISHQ9NSE2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
CISHQ9NSE2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CISHQ9NSE2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.77■■□□□ 1.72
CISHQ9NSE2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CISHQ9NSE2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CISHQ9NSE2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CISHQ9NSE2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.76■■□□□ 1.71
CISHQ9NSE2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CISHQ9NSE2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.76■■□□□ 1.71
CISHQ9NSE2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CISHQ9NSE2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.76■■□□□ 1.71
CISHQ9NSE2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.76■■□□□ 1.71
CISHQ9NSE2 AC096887.2-201ENST00000623443 1957 ntBASIC25.75■■□□□ 1.71
CISHQ9NSE2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CISHQ9NSE2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CISHQ9NSE2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CISHQ9NSE2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CISHQ9NSE2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CISHQ9NSE2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.75■■□□□ 1.71
CISHQ9NSE2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CISHQ9NSE2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CISHQ9NSE2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CISHQ9NSE2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.74■■□□□ 1.71
CISHQ9NSE2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CISHQ9NSE2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.74■■□□□ 1.71
CISHQ9NSE2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CISHQ9NSE2 NTF6A-201ENST00000591175 560 ntBASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms