Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SPON1Q9HCB6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SPON1Q9HCB6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SPON1Q9HCB6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SPON1Q9HCB6 PBX2P1-201ENST00000493219 1291 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 MIR6724-1-201ENST00000616420 92 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 MIR6724-2-201ENST00000616483 92 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 MIR6724-4-201ENST00000617390 92 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 MIR6724-3-201ENST00000622482 92 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 AL135925.1-201ENST00000605920 1701 ntBASIC31.09■■■□□ 2.57
SPON1Q9HCB6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SPON1Q9HCB6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPON1Q9HCB6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPON1Q9HCB6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SPON1Q9HCB6 AC010997.5-201ENST00000609182 354 ntBASIC31.07■■■□□ 2.56
SPON1Q9HCB6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
SPON1Q9HCB6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.07■■■□□ 2.56
SPON1Q9HCB6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPON1Q9HCB6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SPON1Q9HCB6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPON1Q9HCB6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPON1Q9HCB6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.03■■■□□ 2.56
SPON1Q9HCB6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SPON1Q9HCB6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
SPON1Q9HCB6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SPON1Q9HCB6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SPON1Q9HCB6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.02■■■□□ 2.56
SPON1Q9HCB6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
SPON1Q9HCB6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SPON1Q9HCB6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SPON1Q9HCB6 AL359504.2-201ENST00000605506 1601 ntBASIC31.02■■■□□ 2.56
SPON1Q9HCB6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.01■■■□□ 2.55
SPON1Q9HCB6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31■■■□□ 2.55
SPON1Q9HCB6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31■■■□□ 2.55
SPON1Q9HCB6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.99■■■□□ 2.55
SPON1Q9HCB6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
SPON1Q9HCB6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPON1Q9HCB6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
SPON1Q9HCB6 SUDS3P1-201ENST00000505831 966 ntBASIC30.98■■■□□ 2.55
SPON1Q9HCB6 AL512631.2-201ENST00000604634 923 ntBASIC30.98■■■□□ 2.55
SPON1Q9HCB6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPON1Q9HCB6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.97■■■□□ 2.55
SPON1Q9HCB6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.97■■■□□ 2.55
SPON1Q9HCB6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.97■■■□□ 2.55
SPON1Q9HCB6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.96■■■□□ 2.55
SPON1Q9HCB6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.96■■■□□ 2.55
SPON1Q9HCB6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.96■■■□□ 2.55
SPON1Q9HCB6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SPON1Q9HCB6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SPON1Q9HCB6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
SPON1Q9HCB6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SPON1Q9HCB6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SPON1Q9HCB6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
SPON1Q9HCB6 AL031432.3-201ENST00000607698 485 ntBASIC30.95■■■□□ 2.55
SPON1Q9HCB6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.94■■■□□ 2.54
SPON1Q9HCB6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.94■■■□□ 2.54
SPON1Q9HCB6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SPON1Q9HCB6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SPON1Q9HCB6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SPON1Q9HCB6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.93■■■□□ 2.54
SPON1Q9HCB6 AC120024.1-201ENST00000562672 995 ntBASIC30.93■■■□□ 2.54
SPON1Q9HCB6 MTDHP2-201ENST00000601468 714 ntBASIC30.93■■■□□ 2.54
SPON1Q9HCB6 MIR6821-201ENST00000617625 74 ntBASIC30.93■■■□□ 2.54
SPON1Q9HCB6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SPON1Q9HCB6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SPON1Q9HCB6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SPON1Q9HCB6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SPON1Q9HCB6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SPON1Q9HCB6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.91■■■□□ 2.54
SPON1Q9HCB6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.91■■■□□ 2.54
SPON1Q9HCB6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.9■■■□□ 2.54
SPON1Q9HCB6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SPON1Q9HCB6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
SPON1Q9HCB6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
SPON1Q9HCB6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.89■■■□□ 2.54
SPON1Q9HCB6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.89■■■□□ 2.54
SPON1Q9HCB6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.89■■■□□ 2.54
SPON1Q9HCB6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SPON1Q9HCB6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SPON1Q9HCB6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SPON1Q9HCB6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SPON1Q9HCB6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
SPON1Q9HCB6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SPON1Q9HCB6 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.88■■■□□ 2.53
SPON1Q9HCB6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SPON1Q9HCB6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SPON1Q9HCB6 AC100797.4-201ENST00000631653 1827 ntBASIC30.87■■■□□ 2.53
SPON1Q9HCB6 AL162430.1-201ENST00000480705 870 ntBASIC30.87■■■□□ 2.53
SPON1Q9HCB6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SPON1Q9HCB6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SPON1Q9HCB6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SPON1Q9HCB6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SPON1Q9HCB6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms