Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 RPS2P35-201ENST00000443417 897 ntBASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 LINC01971-201ENST00000617888 1048 ntBASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 AC022211.4-201ENST00000625094 2161 ntBASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 MIR219A2-201ENST00000608502 1504 ntBASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD4Q9H0A8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.15■□□□□ 0.98
COMMD4Q9H0A8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 AC096887.2-201ENST00000623443 1957 ntBASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 AC148477.6-201ENST00000623746 465 ntBASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L13-201ENST00000554103 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L15-201ENST00000611059 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L23-201ENST00000615195 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L24-201ENST00000617576 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L22-201ENST00000618238 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L20-201ENST00000619712 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L21-201ENST00000622058 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L10-201ENST00000622460 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L25-201ENST00000624915 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 AC138932.3-201ENST00000567634 1902 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.12■□□□□ 0.97
COMMD4Q9H0A8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.12■□□□□ 0.97
COMMD4Q9H0A8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 AL359258.2-201ENST00000564063 1566 ntBASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 AL139125.2-201ENST00000623134 1869 ntBASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD4Q9H0A8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD4Q9H0A8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms