Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
NKX6-2Q9C056 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-2Q9C056 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 AP002414.2-202ENST00000590929 1450 ntBASIC19.44■□□□□ 0.7
NKX6-2Q9C056 AC127502.1-201ENST00000399971 1502 ntBASIC19.44■□□□□ 0.7
NKX6-2Q9C056 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-2Q9C056 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-2Q9C056 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NKX6-2Q9C056 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX6-2Q9C056 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-2Q9C056 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-2Q9C056 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX6-2Q9C056 DUSP8P5-201ENST00000422884 1815 ntBASIC19.41■□□□□ 0.7
NKX6-2Q9C056 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-2Q9C056 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 AC097639.1-201ENST00000565519 1891 ntBASIC19.4■□□□□ 0.7
NKX6-2Q9C056 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-2Q9C056 SLC25A24-204ENST00000569674 2357 ntBASIC19.4■□□□□ 0.7
NKX6-2Q9C056 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NKX6-2Q9C056 AC100797.4-201ENST00000631653 1827 ntBASIC19.39■□□□□ 0.7
NKX6-2Q9C056 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-2Q9C056 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-2Q9C056 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX6-2Q9C056 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-2Q9C056 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX6-2Q9C056 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX6-2Q9C056 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-2Q9C056 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 AC022211.4-201ENST00000625094 2161 ntBASIC19.36■□□□□ 0.69
NKX6-2Q9C056 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX6-2Q9C056 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-2Q9C056 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-2Q9C056 AL117328.2-201ENST00000624617 1940 ntBASIC19.35■□□□□ 0.69
NKX6-2Q9C056 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NKX6-2Q9C056 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
NKX6-2Q9C056 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.33■□□□□ 0.69
NKX6-2Q9C056 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX6-2Q9C056 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX6-2Q9C056 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms