Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB3Q92617 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB3Q92617 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPIPB3Q92617 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB3Q92617 HLA-V-202ENST00000446817 847 ntBASIC18.98■□□□□ 0.63
NPIPB3Q92617 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB3Q92617 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.97■□□□□ 0.63
NPIPB3Q92617 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB3Q92617 AC093323.1-202ENST00000635031 2045 ntBASIC18.97■□□□□ 0.63
NPIPB3Q92617 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NPIPB3Q92617 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB3Q92617 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NPIPB3Q92617 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.97■□□□□ 0.63
NPIPB3Q92617 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB3Q92617 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.97■□□□□ 0.63
NPIPB3Q92617 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPB3Q92617 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB3Q92617 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB3Q92617 AL359504.2-201ENST00000605506 1601 ntBASIC18.96■□□□□ 0.63
NPIPB3Q92617 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NPIPB3Q92617 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 ZNRF2P2-203ENST00000454624 420 ntBASIC18.96■□□□□ 0.63
NPIPB3Q92617 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NPIPB3Q92617 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
NPIPB3Q92617 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB3Q92617 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPB3Q92617 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
NPIPB3Q92617 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NPIPB3Q92617 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPB3Q92617 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPB3Q92617 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPB3Q92617 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPB3Q92617 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPB3Q92617 AC142381.3-201ENST00000568208 1670 ntBASIC18.95■□□□□ 0.62
NPIPB3Q92617 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPB3Q92617 AC096887.2-201ENST00000623443 1957 ntBASIC18.94■□□□□ 0.62
NPIPB3Q92617 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPB3Q92617 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NPIPB3Q92617 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPB3Q92617 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPB3Q92617 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPB3Q92617 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPB3Q92617 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPIPB3Q92617 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPB3Q92617 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NPIPB3Q92617 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPB3Q92617 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPB3Q92617 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPB3Q92617 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPB3Q92617 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPB3Q92617 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPB3Q92617 AC022211.4-201ENST00000625094 2161 ntBASIC18.92■□□□□ 0.62
NPIPB3Q92617 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPB3Q92617 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPB3Q92617 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPB3Q92617 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPB3Q92617 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPB3Q92617 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPB3Q92617 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPB3Q92617 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPB3Q92617 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPB3Q92617 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPB3Q92617 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPB3Q92617 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB3Q92617 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB3Q92617 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NPIPB3Q92617 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPB3Q92617 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB3Q92617 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB3Q92617 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB3Q92617 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB3Q92617 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB3Q92617 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB3Q92617 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NPIPB3Q92617 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB3Q92617 AC138932.3-201ENST00000567634 1902 ntBASIC18.88■□□□□ 0.61
NPIPB3Q92617 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB3Q92617 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB3Q92617 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB3Q92617 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB3Q92617 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB3Q92617 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPB3Q92617 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPB3Q92617 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms