Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 MIR219A2-201ENST00000608502 1504 ntBASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RTN4IP1Q8WWV3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 AC142381.3-201ENST00000568208 1670 ntBASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4IP1Q8WWV3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4IP1Q8WWV3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4IP1Q8WWV3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4IP1Q8WWV3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4IP1Q8WWV3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4IP1Q8WWV3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4IP1Q8WWV3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4IP1Q8WWV3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN4IP1Q8WWV3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4IP1Q8WWV3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4IP1Q8WWV3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4IP1Q8WWV3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4IP1Q8WWV3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4IP1Q8WWV3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4IP1Q8WWV3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RTN4IP1Q8WWV3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 AC022211.4-201ENST00000625094 2161 ntBASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 MIR639-201ENST00000384974 98 ntBASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4IP1Q8WWV3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4IP1Q8WWV3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.08■□□□□ 0.81
RTN4IP1Q8WWV3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.08■□□□□ 0.81
RTN4IP1Q8WWV3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4IP1Q8WWV3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4IP1Q8WWV3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms