Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.42■■■□□ 2.14
SMARCC2Q8TAQ2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMARCC2Q8TAQ2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 AC010501.1-201ENST00000606270 1962 ntBASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
SMARCC2Q8TAQ2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.39■■■□□ 2.14
SMARCC2Q8TAQ2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SMARCC2Q8TAQ2 AC020928.2-201ENST00000588717 2197 ntBASIC28.38■■■□□ 2.13
SMARCC2Q8TAQ2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMARCC2Q8TAQ2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
SMARCC2Q8TAQ2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SMARCC2Q8TAQ2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SMARCC2Q8TAQ2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
SMARCC2Q8TAQ2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.36■■■□□ 2.13
SMARCC2Q8TAQ2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SMARCC2Q8TAQ2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC2Q8TAQ2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC2Q8TAQ2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMARCC2Q8TAQ2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SMARCC2Q8TAQ2 SMPD5-203ENST00000639008 1464 ntBASIC28.33■■■□□ 2.13
SMARCC2Q8TAQ2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.32■■■□□ 2.12
SMARCC2Q8TAQ2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.31■■■□□ 2.12
SMARCC2Q8TAQ2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
SMARCC2Q8TAQ2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SMARCC2Q8TAQ2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SMARCC2Q8TAQ2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
SMARCC2Q8TAQ2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
SMARCC2Q8TAQ2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC2Q8TAQ2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.29■■■□□ 2.12
SMARCC2Q8TAQ2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC2Q8TAQ2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC2Q8TAQ2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.28■■■□□ 2.12
SMARCC2Q8TAQ2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.28■■■□□ 2.12
SMARCC2Q8TAQ2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 AC025884.2-201ENST00000553429 711 ntBASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 AC007029.1-201ENST00000604183 313 ntBASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC2Q8TAQ2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.26■■■□□ 2.12
SMARCC2Q8TAQ2 NTF6A-201ENST00000591175 560 ntBASIC28.26■■■□□ 2.11
SMARCC2Q8TAQ2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
SMARCC2Q8TAQ2 AC096887.2-201ENST00000623443 1957 ntBASIC28.26■■■□□ 2.11
SMARCC2Q8TAQ2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SMARCC2Q8TAQ2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC2Q8TAQ2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.25■■■□□ 2.11
SMARCC2Q8TAQ2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC2Q8TAQ2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC2Q8TAQ2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 U85056.1-201ENST00000616429 682 ntBASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC2Q8TAQ2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
SMARCC2Q8TAQ2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
SMARCC2Q8TAQ2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms