Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 AC009831.1-201ENST00000580420 1582 ntBASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.59■■□□□ 1.37
CCSMST1Q4G0I0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.58■■□□□ 1.37
CCSMST1Q4G0I0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCSMST1Q4G0I0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCSMST1Q4G0I0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCSMST1Q4G0I0 RAP2CP1-202ENST00000605179 643 ntBASIC23.58■■□□□ 1.37
CCSMST1Q4G0I0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCSMST1Q4G0I0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.36
CCSMST1Q4G0I0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCSMST1Q4G0I0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 U85056.1-201ENST00000616429 682 ntBASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.56■■□□□ 1.36
CCSMST1Q4G0I0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCSMST1Q4G0I0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCSMST1Q4G0I0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCSMST1Q4G0I0 AC133552.2-201ENST00000619106 1032 ntBASIC23.55■■□□□ 1.36
CCSMST1Q4G0I0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CCSMST1Q4G0I0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCSMST1Q4G0I0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCSMST1Q4G0I0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CCSMST1Q4G0I0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCSMST1Q4G0I0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCSMST1Q4G0I0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.53■■□□□ 1.36
CCSMST1Q4G0I0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCSMST1Q4G0I0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.53■■□□□ 1.36
CCSMST1Q4G0I0 AC145676.1-201ENST00000514988 2004 ntBASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 ABHD17AP5-201ENST00000580133 923 ntBASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 DUSP8P4-201ENST00000399538 1761 ntBASIC23.52■■□□□ 1.36
CCSMST1Q4G0I0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCSMST1Q4G0I0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCSMST1Q4G0I0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.51■■□□□ 1.35
CCSMST1Q4G0I0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCSMST1Q4G0I0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.51■■□□□ 1.35
CCSMST1Q4G0I0 AL592293.1-201ENST00000502889 1188 ntBASIC23.5■■□□□ 1.35
CCSMST1Q4G0I0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCSMST1Q4G0I0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCSMST1Q4G0I0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 AC010501.1-201ENST00000606270 1962 ntBASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 AC096887.2-201ENST00000623443 1957 ntBASIC23.49■■□□□ 1.35
CCSMST1Q4G0I0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCSMST1Q4G0I0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.47■■□□□ 1.35
CCSMST1Q4G0I0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CCSMST1Q4G0I0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
CCSMST1Q4G0I0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms