Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 AC022616.5-201ENST00000518796 181 ntBASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 MIR3621-201ENST00000580529 85 ntBASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 AC092028.1-203ENST00000608262 953 ntBASIC23.89■■□□□ 1.41
RSPO4Q2I0M5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 KRT18P24-201ENST00000344739 1156 ntBASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 AC142381.2-201ENST00000566120 298 ntBASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.88■■□□□ 1.41
RSPO4Q2I0M5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 MIR4466-201ENST00000606121 54 ntBASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO4Q2I0M5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.86■■□□□ 1.41
RSPO4Q2I0M5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RSPO4Q2I0M5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.86■■□□□ 1.41
RSPO4Q2I0M5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO4Q2I0M5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO4Q2I0M5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO4Q2I0M5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO4Q2I0M5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 AL356740.2-201ENST00000601559 647 ntBASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPO4Q2I0M5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RSPO4Q2I0M5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.82■■□□□ 1.4
RSPO4Q2I0M5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 AL359504.2-201ENST00000605506 1601 ntBASIC23.81■■□□□ 1.4
RSPO4Q2I0M5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 PBX2P1-201ENST00000493219 1291 ntBASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 AC010997.5-201ENST00000609182 354 ntBASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RSPO4Q2I0M5 MIR6724-1-201ENST00000616420 92 ntBASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 MIR6724-2-201ENST00000616483 92 ntBASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 AC106739.1-201ENST00000617035 715 ntBASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 MIR6724-4-201ENST00000617390 92 ntBASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 MIR6724-3-201ENST00000622482 92 ntBASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RSPO4Q2I0M5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPO4Q2I0M5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPO4Q2I0M5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RSPO4Q2I0M5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.77■■□□□ 1.4
RSPO4Q2I0M5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RSPO4Q2I0M5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RSPO4Q2I0M5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.76■■□□□ 1.39
RSPO4Q2I0M5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RSPO4Q2I0M5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RSPO4Q2I0M5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RSPO4Q2I0M5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RSPO4Q2I0M5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPO4Q2I0M5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 AC100797.4-201ENST00000631653 1827 ntBASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms