Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
R3HDM1Q15032 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
R3HDM1Q15032 PBX2P1-201ENST00000493219 1291 ntBASIC31.48■■■□□ 2.63
R3HDM1Q15032 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.48■■■□□ 2.63
R3HDM1Q15032 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
R3HDM1Q15032 AL135925.1-201ENST00000605920 1701 ntBASIC31.47■■■□□ 2.63
R3HDM1Q15032 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
R3HDM1Q15032 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
R3HDM1Q15032 AC106739.1-201ENST00000617035 715 ntBASIC31.47■■■□□ 2.63
R3HDM1Q15032 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
R3HDM1Q15032 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
R3HDM1Q15032 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
R3HDM1Q15032 AC022616.5-201ENST00000518796 181 ntBASIC31.46■■■□□ 2.63
R3HDM1Q15032 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.46■■■□□ 2.63
R3HDM1Q15032 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.46■■■□□ 2.63
R3HDM1Q15032 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
R3HDM1Q15032 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.45■■■□□ 2.63
R3HDM1Q15032 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
R3HDM1Q15032 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
R3HDM1Q15032 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
R3HDM1Q15032 AL356740.2-201ENST00000601559 647 ntBASIC31.44■■■□□ 2.62
R3HDM1Q15032 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.44■■■□□ 2.62
R3HDM1Q15032 AC010997.5-201ENST00000609182 354 ntBASIC31.43■■■□□ 2.62
R3HDM1Q15032 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
R3HDM1Q15032 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
R3HDM1Q15032 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
R3HDM1Q15032 MIR6724-1-201ENST00000616420 92 ntBASIC31.41■■■□□ 2.62
R3HDM1Q15032 MIR6724-2-201ENST00000616483 92 ntBASIC31.41■■■□□ 2.62
R3HDM1Q15032 MIR6724-4-201ENST00000617390 92 ntBASIC31.41■■■□□ 2.62
R3HDM1Q15032 MIR6724-3-201ENST00000622482 92 ntBASIC31.41■■■□□ 2.62
R3HDM1Q15032 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
R3HDM1Q15032 AL359504.2-201ENST00000605506 1601 ntBASIC31.41■■■□□ 2.62
R3HDM1Q15032 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
R3HDM1Q15032 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.39■■■□□ 2.62
R3HDM1Q15032 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.39■■■□□ 2.62
R3HDM1Q15032 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
R3HDM1Q15032 AL512631.2-201ENST00000604634 923 ntBASIC31.38■■■□□ 2.61
R3HDM1Q15032 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
R3HDM1Q15032 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.38■■■□□ 2.61
R3HDM1Q15032 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
R3HDM1Q15032 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
R3HDM1Q15032 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
R3HDM1Q15032 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.37■■■□□ 2.61
R3HDM1Q15032 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
R3HDM1Q15032 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.36■■■□□ 2.61
R3HDM1Q15032 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
R3HDM1Q15032 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
R3HDM1Q15032 SUDS3P1-201ENST00000505831 966 ntBASIC31.36■■■□□ 2.61
R3HDM1Q15032 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
R3HDM1Q15032 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.36■■■□□ 2.61
R3HDM1Q15032 AL031432.3-201ENST00000607698 485 ntBASIC31.36■■■□□ 2.61
R3HDM1Q15032 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
R3HDM1Q15032 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
R3HDM1Q15032 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.35■■■□□ 2.61
R3HDM1Q15032 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
R3HDM1Q15032 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
R3HDM1Q15032 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
R3HDM1Q15032 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.34■■■□□ 2.61
R3HDM1Q15032 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.34■■■□□ 2.61
R3HDM1Q15032 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
R3HDM1Q15032 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
R3HDM1Q15032 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
R3HDM1Q15032 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
R3HDM1Q15032 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
R3HDM1Q15032 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
R3HDM1Q15032 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.32■■■□□ 2.6
R3HDM1Q15032 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
R3HDM1Q15032 AC100797.4-201ENST00000631653 1827 ntBASIC31.31■■■□□ 2.6
R3HDM1Q15032 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
R3HDM1Q15032 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.31■■■□□ 2.6
R3HDM1Q15032 AC120024.1-201ENST00000562672 995 ntBASIC31.31■■■□□ 2.6
R3HDM1Q15032 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.31■■■□□ 2.6
R3HDM1Q15032 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
R3HDM1Q15032 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
R3HDM1Q15032 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.3■■■□□ 2.6
R3HDM1Q15032 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.3■■■□□ 2.6
R3HDM1Q15032 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
R3HDM1Q15032 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.3■■■□□ 2.6
R3HDM1Q15032 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.3■■■□□ 2.6
R3HDM1Q15032 AL162430.1-201ENST00000480705 870 ntBASIC31.29■■■□□ 2.6
R3HDM1Q15032 MIR6821-201ENST00000617625 74 ntBASIC31.29■■■□□ 2.6
R3HDM1Q15032 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
R3HDM1Q15032 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
R3HDM1Q15032 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
R3HDM1Q15032 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
R3HDM1Q15032 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.28■■■□□ 2.6
R3HDM1Q15032 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
R3HDM1Q15032 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
R3HDM1Q15032 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.27■■■□□ 2.6
R3HDM1Q15032 MTDHP2-201ENST00000601468 714 ntBASIC31.27■■■□□ 2.6
R3HDM1Q15032 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
R3HDM1Q15032 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
R3HDM1Q15032 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
R3HDM1Q15032 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.26■■■□□ 2.59
R3HDM1Q15032 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
R3HDM1Q15032 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
R3HDM1Q15032 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
R3HDM1Q15032 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.25■■■□□ 2.59
R3HDM1Q15032 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
R3HDM1Q15032 AC090192.1-201ENST00000517740 490 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms