Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.77■■□□□ 1.4
CLNS1AP54105 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.77■■□□□ 1.4
CLNS1AP54105 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.77■■□□□ 1.4
CLNS1AP54105 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLNS1AP54105 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.77■■□□□ 1.4
CLNS1AP54105 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.77■■□□□ 1.4
CLNS1AP54105 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLNS1AP54105 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLNS1AP54105 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLNS1AP54105 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLNS1AP54105 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.76■■□□□ 1.39
CLNS1AP54105 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLNS1AP54105 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLNS1AP54105 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CLNS1AP54105 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLNS1AP54105 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLNS1AP54105 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLNS1AP54105 ERN1-208ENST00000606895 2068 ntBASIC23.75■■□□□ 1.39
CLNS1AP54105 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLNS1AP54105 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLNS1AP54105 AC110285.7-201ENST00000624417 1536 ntBASIC23.74■■□□□ 1.39
CLNS1AP54105 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLNS1AP54105 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CLNS1AP54105 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.74■■□□□ 1.39
CLNS1AP54105 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.74■■□□□ 1.39
CLNS1AP54105 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLNS1AP54105 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLNS1AP54105 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLNS1AP54105 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLNS1AP54105 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CLNS1AP54105 AL162393.1-201ENST00000437852 946 ntBASIC23.73■■□□□ 1.39
CLNS1AP54105 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLNS1AP54105 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLNS1AP54105 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLNS1AP54105 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.71■■□□□ 1.39
CLNS1AP54105 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLNS1AP54105 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLNS1AP54105 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.71■■□□□ 1.39
CLNS1AP54105 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.7■■□□□ 1.39
CLNS1AP54105 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.7■■□□□ 1.38
CLNS1AP54105 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.7■■□□□ 1.38
CLNS1AP54105 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLNS1AP54105 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLNS1AP54105 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.69■■□□□ 1.38
CLNS1AP54105 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLNS1AP54105 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.69■■□□□ 1.38
CLNS1AP54105 DUSP8P4-201ENST00000399538 1761 ntBASIC23.68■■□□□ 1.38
CLNS1AP54105 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.68■■□□□ 1.38
CLNS1AP54105 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 AP004609.3-201ENST00000610705 1884 ntBASIC23.68■■□□□ 1.38
CLNS1AP54105 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLNS1AP54105 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLNS1AP54105 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLNS1AP54105 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLNS1AP54105 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CLNS1AP54105 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.66■■□□□ 1.38
CLNS1AP54105 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLNS1AP54105 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
CLNS1AP54105 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.65■■□□□ 1.38
CLNS1AP54105 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CLNS1AP54105 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CLNS1AP54105 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLNS1AP54105 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.65■■□□□ 1.38
CLNS1AP54105 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.65■■□□□ 1.38
CLNS1AP54105 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CLNS1AP54105 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLNS1AP54105 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
CLNS1AP54105 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLNS1AP54105 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CLNS1AP54105 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CLNS1AP54105 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CLNS1AP54105 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLNS1AP54105 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLNS1AP54105 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.63■■□□□ 1.37
CLNS1AP54105 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLNS1AP54105 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLNS1AP54105 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLNS1AP54105 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLNS1AP54105 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.61■■□□□ 1.37
CLNS1AP54105 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLNS1AP54105 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms