Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.14■□□□□ 0.18
CXCL5P42830 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 AC012676.1-201ENST00000574705 1949 ntBASIC16.14■□□□□ 0.17
CXCL5P42830 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CXCL5P42830 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.14■□□□□ 0.17
CXCL5P42830 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CXCL5P42830 ERN1-208ENST00000606895 2068 ntBASIC16.14■□□□□ 0.17
CXCL5P42830 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CXCL5P42830 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.13■□□□□ 0.17
CXCL5P42830 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.13■□□□□ 0.17
CXCL5P42830 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.13■□□□□ 0.17
CXCL5P42830 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CXCL5P42830 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CXCL5P42830 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CXCL5P42830 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CXCL5P42830 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CXCL5P42830 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.12■□□□□ 0.17
CXCL5P42830 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.12■□□□□ 0.17
CXCL5P42830 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.12■□□□□ 0.17
CXCL5P42830 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCL5P42830 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CXCL5P42830 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.11■□□□□ 0.17
CXCL5P42830 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CXCL5P42830 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCL5P42830 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCL5P42830 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCL5P42830 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CXCL5P42830 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCL5P42830 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCL5P42830 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CXCL5P42830 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CXCL5P42830 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CXCL5P42830 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCL5P42830 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCL5P42830 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCL5P42830 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CXCL5P42830 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 DUX4L29-201ENST00000425409 679 ntBASIC16.08■□□□□ 0.16
CXCL5P42830 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CXCL5P42830 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
CXCL5P42830 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCL5P42830 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCL5P42830 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCL5P42830 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCL5P42830 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CXCL5P42830 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCL5P42830 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCL5P42830 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXCL5P42830 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.06■□□□□ 0.16
CXCL5P42830 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CXCL5P42830 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCL5P42830 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCL5P42830 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCL5P42830 AC008813.1-201ENST00000536597 885 ntBASIC16.05■□□□□ 0.16
CXCL5P42830 AC021231.2-201ENST00000594613 730 ntBASIC16.05■□□□□ 0.16
CXCL5P42830 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms