Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LINGO3P0C6S8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LINGO3P0C6S8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.21■■□□□ 1.31
LINGO3P0C6S8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LINGO3P0C6S8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
LINGO3P0C6S8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LINGO3P0C6S8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LINGO3P0C6S8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.2■■□□□ 1.3
LINGO3P0C6S8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.19■■□□□ 1.3
LINGO3P0C6S8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.18■■□□□ 1.3
LINGO3P0C6S8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.18■■□□□ 1.3
LINGO3P0C6S8 DUX4L11-201ENST00000611504 1267 ntBASIC23.18■■□□□ 1.3
LINGO3P0C6S8 DUX4L12-201ENST00000614593 1267 ntBASIC23.18■■□□□ 1.3
LINGO3P0C6S8 DUX4L14-201ENST00000621227 1267 ntBASIC23.18■■□□□ 1.3
LINGO3P0C6S8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LINGO3P0C6S8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.18■■□□□ 1.3
LINGO3P0C6S8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LINGO3P0C6S8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LINGO3P0C6S8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.17■■□□□ 1.3
LINGO3P0C6S8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LINGO3P0C6S8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LINGO3P0C6S8 AC092803.2-201ENST00000564287 1899 ntBASIC23.15■■□□□ 1.3
LINGO3P0C6S8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINGO3P0C6S8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.14■■□□□ 1.29
LINGO3P0C6S8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L13-201ENST00000554103 1267 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L15-201ENST00000611059 1267 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 MIR7108-201ENST00000614319 87 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L23-201ENST00000615195 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L24-201ENST00000617576 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L22-201ENST00000618238 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L20-201ENST00000619712 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L21-201ENST00000622058 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L10-201ENST00000622460 1267 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 DUX4L25-201ENST00000624915 1269 ntBASIC23.13■■□□□ 1.29
LINGO3P0C6S8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LINGO3P0C6S8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LINGO3P0C6S8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.12■■□□□ 1.29
LINGO3P0C6S8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LINGO3P0C6S8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.12■■□□□ 1.29
LINGO3P0C6S8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LINGO3P0C6S8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
LINGO3P0C6S8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.11■■□□□ 1.29
LINGO3P0C6S8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINGO3P0C6S8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 AL139125.2-201ENST00000623134 1869 ntBASIC23.09■■□□□ 1.29
LINGO3P0C6S8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
LINGO3P0C6S8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 AC110285.7-201ENST00000624417 1536 ntBASIC23.08■■□□□ 1.29
LINGO3P0C6S8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
LINGO3P0C6S8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LINGO3P0C6S8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LINGO3P0C6S8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LINGO3P0C6S8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.07■■□□□ 1.28
LINGO3P0C6S8 AL024507.2-201ENST00000606070 2574 ntBASIC23.06■■□□□ 1.28
LINGO3P0C6S8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
LINGO3P0C6S8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms