Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.46■□□□□ 0.87
CD3DP04234 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD3DP04234 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.46■□□□□ 0.87
CD3DP04234 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.45■□□□□ 0.86
CD3DP04234 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD3DP04234 AC096887.2-201ENST00000623443 1957 ntBASIC20.44■□□□□ 0.86
CD3DP04234 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD3DP04234 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD3DP04234 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CD3DP04234 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CD3DP04234 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD3DP04234 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD3DP04234 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.43■□□□□ 0.86
CD3DP04234 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD3DP04234 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD3DP04234 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CD3DP04234 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD3DP04234 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.42■□□□□ 0.86
CD3DP04234 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.42■□□□□ 0.86
CD3DP04234 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD3DP04234 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD3DP04234 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD3DP04234 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.42■□□□□ 0.86
CD3DP04234 AC012676.1-201ENST00000574705 1949 ntBASIC20.41■□□□□ 0.86
CD3DP04234 LINC01124-201ENST00000409786 2117 ntBASIC20.41■□□□□ 0.86
CD3DP04234 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD3DP04234 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD3DP04234 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD3DP04234 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD3DP04234 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD3DP04234 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD3DP04234 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CD3DP04234 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD3DP04234 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CD3DP04234 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD3DP04234 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.39■□□□□ 0.85
CD3DP04234 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.39■□□□□ 0.85
CD3DP04234 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CD3DP04234 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD3DP04234 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD3DP04234 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD3DP04234 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD3DP04234 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD3DP04234 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD3DP04234 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.38■□□□□ 0.85
CD3DP04234 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CD3DP04234 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD3DP04234 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CD3DP04234 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD3DP04234 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.37■□□□□ 0.85
CD3DP04234 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.36■□□□□ 0.85
CD3DP04234 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.36■□□□□ 0.85
CD3DP04234 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD3DP04234 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD3DP04234 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD3DP04234 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD3DP04234 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD3DP04234 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.35■□□□□ 0.85
CD3DP04234 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
CD3DP04234 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.35■□□□□ 0.85
CD3DP04234 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD3DP04234 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD3DP04234 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD3DP04234 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD3DP04234 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CD3DP04234 SUZ12P1-203ENST00000578195 985 ntBASIC20.34■□□□□ 0.85
CD3DP04234 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.34■□□□□ 0.85
CD3DP04234 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.34■□□□□ 0.85
CD3DP04234 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD3DP04234 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD3DP04234 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CD3DP04234 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms