Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB1P01920 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB1P01920 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB1P01920 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB1P01920 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB1P01920 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HLA-DQB1P01920 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB1P01920 LINC01124-201ENST00000409786 2117 ntBASIC20.9■□□□□ 0.94
HLA-DQB1P01920 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB1P01920 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQB1P01920 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB1P01920 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB1P01920 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HLA-DQB1P01920 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB1P01920 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB1P01920 AC005559.1-201ENST00000589661 871 ntBASIC20.88■□□□□ 0.93
HLA-DQB1P01920 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB1P01920 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB1P01920 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DQB1P01920 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 DUSP8P5-201ENST00000422884 1815 ntBASIC20.86■□□□□ 0.93
HLA-DQB1P01920 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB1P01920 AC096887.2-201ENST00000623443 1957 ntBASIC20.85■□□□□ 0.93
HLA-DQB1P01920 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HLA-DQB1P01920 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB1P01920 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DQB1P01920 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.85■□□□□ 0.93
HLA-DQB1P01920 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 AC108673.1-201ENST00000510422 1159 ntBASIC20.84■□□□□ 0.93
HLA-DQB1P01920 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB1P01920 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQB1P01920 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.83■□□□□ 0.92
HLA-DQB1P01920 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.83■□□□□ 0.92
HLA-DQB1P01920 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB1P01920 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB1P01920 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB1P01920 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB1P01920 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQB1P01920 SUZ12P1-203ENST00000578195 985 ntBASIC20.82■□□□□ 0.92
HLA-DQB1P01920 MIR6090-201ENST00000622481 60 ntBASIC20.82■□□□□ 0.92
HLA-DQB1P01920 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB1P01920 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB1P01920 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DQB1P01920 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DQB1P01920 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB1P01920 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms