Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGB1A6NKQ9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.29■□□□□ 0.68
CGB1A6NKQ9 MIR7108-201ENST00000614319 87 ntBASIC19.29■□□□□ 0.68
CGB1A6NKQ9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CGB1A6NKQ9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CGB1A6NKQ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGB1A6NKQ9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGB1A6NKQ9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGB1A6NKQ9 AC096887.2-201ENST00000623443 1957 ntBASIC19.27■□□□□ 0.68
CGB1A6NKQ9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CGB1A6NKQ9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CGB1A6NKQ9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.26■□□□□ 0.67
CGB1A6NKQ9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGB1A6NKQ9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CGB1A6NKQ9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGB1A6NKQ9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CGB1A6NKQ9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGB1A6NKQ9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGB1A6NKQ9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGB1A6NKQ9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 AC126177.7-201ENST00000547904 679 ntBASIC19.24■□□□□ 0.67
CGB1A6NKQ9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGB1A6NKQ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGB1A6NKQ9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGB1A6NKQ9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 AL157400.5-201ENST00000507624 621 ntBASIC19.21■□□□□ 0.67
CGB1A6NKQ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CGB1A6NKQ9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CGB1A6NKQ9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.19■□□□□ 0.66
CGB1A6NKQ9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 MIR639-201ENST00000384974 98 ntBASIC19.18■□□□□ 0.66
CGB1A6NKQ9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 AC060814.1-201ENST00000554326 538 ntBASIC19.18■□□□□ 0.66
CGB1A6NKQ9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CGB1A6NKQ9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB1A6NKQ9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms