Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CALR3Q96L12 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.69■■□□□ 1.7
CALR3Q96L12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.69■■□□□ 1.7
CALR3Q96L12 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.68■■□□□ 1.7
CALR3Q96L12 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 ERN1-208ENST00000606895 2068 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L11-201ENST00000611504 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L12-201ENST00000614593 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L14-201ENST00000621227 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CALR3Q96L12 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CALR3Q96L12 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CALR3Q96L12 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.66■■□□□ 1.7
CALR3Q96L12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.65■■□□□ 1.7
CALR3Q96L12 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CALR3Q96L12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CALR3Q96L12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.64■■□□□ 1.7
CALR3Q96L12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CALR3Q96L12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
CALR3Q96L12 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.64■■□□□ 1.69
CALR3Q96L12 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CALR3Q96L12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.64■■□□□ 1.69
CALR3Q96L12 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.63■■□□□ 1.69
CALR3Q96L12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CALR3Q96L12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.62■■□□□ 1.69
CALR3Q96L12 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.62■■□□□ 1.69
CALR3Q96L12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 AC142381.3-201ENST00000568208 1670 ntBASIC25.61■■□□□ 1.69
CALR3Q96L12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.61■■□□□ 1.69
CALR3Q96L12 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CALR3Q96L12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.6■■□□□ 1.69
CALR3Q96L12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.6■■□□□ 1.69
CALR3Q96L12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 AL359258.2-201ENST00000564063 1566 ntBASIC25.6■■□□□ 1.69
CALR3Q96L12 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.59■■□□□ 1.69
CALR3Q96L12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CALR3Q96L12 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.58■■□□□ 1.69
CALR3Q96L12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
CALR3Q96L12 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 RPS2P35-201ENST00000443417 897 ntBASIC25.58■■□□□ 1.69
CALR3Q96L12 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.57■■□□□ 1.68
CALR3Q96L12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
CALR3Q96L12 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CALR3Q96L12 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CALR3Q96L12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.56■■□□□ 1.68
CALR3Q96L12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CALR3Q96L12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CALR3Q96L12 AL359504.2-201ENST00000605506 1601 ntBASIC25.55■■□□□ 1.68
CALR3Q96L12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.55■■□□□ 1.68
CALR3Q96L12 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms