Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SH3TC1Q8TE82 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SH3TC1Q8TE82 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
SH3TC1Q8TE82 PVT1_1.1-201ENST00000615125 194 ntBASIC30.75■■■□□ 2.51
SH3TC1Q8TE82 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SH3TC1Q8TE82 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SH3TC1Q8TE82 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.74■■■□□ 2.51
SH3TC1Q8TE82 AC103834.1-201ENST00000520383 144 ntBASIC30.73■■■□□ 2.51
SH3TC1Q8TE82 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.73■■■□□ 2.51
SH3TC1Q8TE82 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SH3TC1Q8TE82 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.73■■■□□ 2.51
SH3TC1Q8TE82 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SH3TC1Q8TE82 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SH3TC1Q8TE82 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.72■■■□□ 2.51
SH3TC1Q8TE82 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SH3TC1Q8TE82 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH3TC1Q8TE82 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH3TC1Q8TE82 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.7■■■□□ 2.5
SH3TC1Q8TE82 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SH3TC1Q8TE82 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SH3TC1Q8TE82 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SH3TC1Q8TE82 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
SH3TC1Q8TE82 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.69■■■□□ 2.5
SH3TC1Q8TE82 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
SH3TC1Q8TE82 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
SH3TC1Q8TE82 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH3TC1Q8TE82 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH3TC1Q8TE82 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 YBX1P4-201ENST00000392794 808 ntBASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.67■■■□□ 2.5
SH3TC1Q8TE82 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 AL449106.1-201ENST00000608517 1980 ntBASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SH3TC1Q8TE82 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SH3TC1Q8TE82 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SH3TC1Q8TE82 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.65■■■□□ 2.5
SH3TC1Q8TE82 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SH3TC1Q8TE82 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 MIR4508-201ENST00000584178 70 ntBASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH3TC1Q8TE82 LINC01003-201ENST00000564834 1764 ntBASIC30.63■■■□□ 2.49
SH3TC1Q8TE82 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.63■■■□□ 2.49
SH3TC1Q8TE82 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SH3TC1Q8TE82 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SH3TC1Q8TE82 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
SH3TC1Q8TE82 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH3TC1Q8TE82 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH3TC1Q8TE82 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SH3TC1Q8TE82 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.6■■■□□ 2.49
SH3TC1Q8TE82 AC009299.2-201ENST00000482477 511 ntBASIC30.6■■■□□ 2.49
SH3TC1Q8TE82 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
SH3TC1Q8TE82 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SH3TC1Q8TE82 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SH3TC1Q8TE82 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.59■■■□□ 2.49
SH3TC1Q8TE82 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SH3TC1Q8TE82 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH3TC1Q8TE82 AC142086.6-201ENST00000621154 1765 ntBASIC30.59■■■□□ 2.49
SH3TC1Q8TE82 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH3TC1Q8TE82 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH3TC1Q8TE82 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH3TC1Q8TE82 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SH3TC1Q8TE82 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 AC087393.1-201ENST00000582896 145 ntBASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH3TC1Q8TE82 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH3TC1Q8TE82 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH3TC1Q8TE82 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
SH3TC1Q8TE82 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SH3TC1Q8TE82 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SH3TC1Q8TE82 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.55■■■□□ 2.48
SH3TC1Q8TE82 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 AC019171.1-201ENST00000601251 1056 ntBASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.54■■■□□ 2.48
SH3TC1Q8TE82 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH3TC1Q8TE82 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
SH3TC1Q8TE82 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH3TC1Q8TE82 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH3TC1Q8TE82 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 AC103724.3-201ENST00000564481 992 ntBASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms