Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL139125.2-201ENST00000623134 1869 ntBASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LRRTM1Q86UE6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM1Q86UE6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM1Q86UE6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM1Q86UE6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRTM1Q86UE6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM1Q86UE6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 AC096887.2-201ENST00000623443 1957 ntBASIC21.03■□□□□ 0.96
LRRTM1Q86UE6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM1Q86UE6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM1Q86UE6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRTM1Q86UE6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21■□□□□ 0.95
LRRTM1Q86UE6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRRTM1Q86UE6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRTM1Q86UE6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
LRRTM1Q86UE6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRTM1Q86UE6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 AC021231.2-201ENST00000594613 730 ntBASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM1Q86UE6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM1Q86UE6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM1Q86UE6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRTM1Q86UE6 AC044849.2-201ENST00000606596 710 ntBASIC20.97■□□□□ 0.95
LRRTM1Q86UE6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRTM1Q86UE6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM1Q86UE6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM1Q86UE6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM1Q86UE6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRTM1Q86UE6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 AL162393.1-201ENST00000437852 946 ntBASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms