Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.13■■□□□ 1.77
DDX53Q86TM3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX53Q86TM3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX53Q86TM3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX53Q86TM3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX53Q86TM3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX53Q86TM3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX53Q86TM3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX53Q86TM3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX53Q86TM3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX53Q86TM3 AC103724.3-201ENST00000564481 992 ntBASIC26.11■■□□□ 1.77
DDX53Q86TM3 AC087393.1-201ENST00000582896 145 ntBASIC26.11■■□□□ 1.77
DDX53Q86TM3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX53Q86TM3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX53Q86TM3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX53Q86TM3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX53Q86TM3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX53Q86TM3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
DDX53Q86TM3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX53Q86TM3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
DDX53Q86TM3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX53Q86TM3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
DDX53Q86TM3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX53Q86TM3 AL031848.2-201ENST00000607670 837 ntBASIC26.07■■□□□ 1.76
DDX53Q86TM3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX53Q86TM3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
DDX53Q86TM3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.06■■□□□ 1.76
DDX53Q86TM3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.06■■□□□ 1.76
DDX53Q86TM3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
DDX53Q86TM3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX53Q86TM3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.05■■□□□ 1.76
DDX53Q86TM3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX53Q86TM3 GUSBP5-201ENST00000418136 578 ntBASIC26.05■■□□□ 1.76
DDX53Q86TM3 RPS2P7-201ENST00000447334 885 ntBASIC26.05■■□□□ 1.76
DDX53Q86TM3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX53Q86TM3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX53Q86TM3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
DDX53Q86TM3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX53Q86TM3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX53Q86TM3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX53Q86TM3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX53Q86TM3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
DDX53Q86TM3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
DDX53Q86TM3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX53Q86TM3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.04■■□□□ 1.76
DDX53Q86TM3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX53Q86TM3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX53Q86TM3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX53Q86TM3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX53Q86TM3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX53Q86TM3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX53Q86TM3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
DDX53Q86TM3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX53Q86TM3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX53Q86TM3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.02■■□□□ 1.76
DDX53Q86TM3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX53Q86TM3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX53Q86TM3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
DDX53Q86TM3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
DDX53Q86TM3 LONRF2P2-201ENST00000439212 571 ntBASIC26.01■■□□□ 1.75
DDX53Q86TM3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX53Q86TM3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX53Q86TM3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
DDX53Q86TM3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.01■■□□□ 1.75
DDX53Q86TM3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
DDX53Q86TM3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX53Q86TM3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX53Q86TM3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
DDX53Q86TM3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26■■□□□ 1.75
DDX53Q86TM3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX53Q86TM3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX53Q86TM3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
DDX53Q86TM3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX53Q86TM3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
DDX53Q86TM3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
DDX53Q86TM3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX53Q86TM3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX53Q86TM3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX53Q86TM3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX53Q86TM3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.98■■□□□ 1.75
DDX53Q86TM3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX53Q86TM3 AL592295.1-201ENST00000400984 884 ntBASIC25.98■■□□□ 1.75
DDX53Q86TM3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
DDX53Q86TM3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
DDX53Q86TM3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
DDX53Q86TM3 AL449106.1-201ENST00000608517 1980 ntBASIC25.98■■□□□ 1.75
DDX53Q86TM3 DRD5P2-201ENST00000421395 2012 ntBASIC25.97■■□□□ 1.75
DDX53Q86TM3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
DDX53Q86TM3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX53Q86TM3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX53Q86TM3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX53Q86TM3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
DDX53Q86TM3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.96■■□□□ 1.75
DDX53Q86TM3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX53Q86TM3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms