Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.02■■■□□ 2.72
CCDC27Q2M243 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC27Q2M243 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC27Q2M243 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.01■■■□□ 2.72
CCDC27Q2M243 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC32.01■■■□□ 2.72
CCDC27Q2M243 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.71
CCDC27Q2M243 MIR3960-201ENST00000583311 91 ntBASIC32.01■■■□□ 2.71
CCDC27Q2M243 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
CCDC27Q2M243 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC27Q2M243 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CCDC27Q2M243 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32■■■□□ 2.71
CCDC27Q2M243 AC007029.1-201ENST00000604183 313 ntBASIC32■■■□□ 2.71
CCDC27Q2M243 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32■■■□□ 2.71
CCDC27Q2M243 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
CCDC27Q2M243 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.99■■■□□ 2.71
CCDC27Q2M243 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC27Q2M243 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.99■■■□□ 2.71
CCDC27Q2M243 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC27Q2M243 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
CCDC27Q2M243 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.99■■■□□ 2.71
CCDC27Q2M243 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC27Q2M243 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CCDC27Q2M243 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC27Q2M243 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CCDC27Q2M243 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC27Q2M243 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.97■■■□□ 2.71
CCDC27Q2M243 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC27Q2M243 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC27Q2M243 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC27Q2M243 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.95■■■□□ 2.71
CCDC27Q2M243 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.95■■■□□ 2.71
CCDC27Q2M243 RARRES2P2-201ENST00000394842 485 ntBASIC31.95■■■□□ 2.71
CCDC27Q2M243 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC27Q2M243 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC27Q2M243 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
CCDC27Q2M243 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC27Q2M243 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC27Q2M243 RP9P-202ENST00000450133 1212 ntBASIC31.94■■■□□ 2.7
CCDC27Q2M243 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC27Q2M243 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC27Q2M243 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC27Q2M243 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC27Q2M243 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC27Q2M243 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC27Q2M243 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CCDC27Q2M243 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC27Q2M243 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC27Q2M243 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC27Q2M243 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC27Q2M243 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC27Q2M243 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC27Q2M243 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC27Q2M243 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC27Q2M243 AC091060.1-201ENST00000623524 1766 ntBASIC31.89■■■□□ 2.7
CCDC27Q2M243 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.89■■■□□ 2.7
CCDC27Q2M243 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC27Q2M243 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC27Q2M243 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC27Q2M243 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC27Q2M243 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC27Q2M243 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC27Q2M243 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC27Q2M243 AC092803.2-201ENST00000564287 1899 ntBASIC31.86■■■□□ 2.69
CCDC27Q2M243 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC27Q2M243 AC093536.1-201ENST00000569153 554 ntBASIC31.86■■■□□ 2.69
CCDC27Q2M243 RAP2CP1-202ENST00000605179 643 ntBASIC31.86■■■□□ 2.69
CCDC27Q2M243 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CCDC27Q2M243 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC27Q2M243 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC27Q2M243 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC27Q2M243 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC27Q2M243 AC026202.3-201ENST00000600805 1127 ntBASIC31.84■■■□□ 2.69
CCDC27Q2M243 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC27Q2M243 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC27Q2M243 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC27Q2M243 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC27Q2M243 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC27Q2M243 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CCDC27Q2M243 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.83■■■□□ 2.69
CCDC27Q2M243 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
CCDC27Q2M243 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.82■■■□□ 2.68
CCDC27Q2M243 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC27Q2M243 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
CCDC27Q2M243 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CCDC27Q2M243 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CCDC27Q2M243 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC27Q2M243 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CCDC27Q2M243 DUSP8P4-201ENST00000399538 1761 ntBASIC31.8■■■□□ 2.68
CCDC27Q2M243 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC27Q2M243 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC27Q2M243 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC27Q2M243 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC27Q2M243 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC27Q2M243 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC27Q2M243 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC27Q2M243 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC27Q2M243 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC27Q2M243 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC27Q2M243 AC145676.1-201ENST00000514988 2004 ntBASIC31.77■■■□□ 2.68
CCDC27Q2M243 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms