Protein–RNA interactions for Protein: Q07666

KHDRBS1, KH domain-containing, RNA-binding, signal transduction-associated protein 1, humanhuman

Known RBP eCLIP

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1Q07666 GOLGA4-207ENST00000437131 6947 ntTSL 1 (best)2.28□□□□□ -2.041e-7■■□□□ 12.9
KHDRBS1Q07666 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.344e-7■■□□□ 12.9
KHDRBS1Q07666 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.074e-7■■□□□ 12.9
KHDRBS1Q07666 ISPD-AS1-203ENST00000457112 658 ntTSL 25.16□□□□□ -1.581e-6■■□□□ 12.8
KHDRBS1Q07666 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.234e-6■■□□□ 12.8
KHDRBS1Q07666 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7□□□□□ -1.294e-6■■□□□ 12.8
KHDRBS1Q07666 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.444e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.322e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.12■□□□□ 0.172e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.022e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-212ENST00000464596 989 ntTSL 57.41□□□□□ -1.222e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.312e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.4□□□□□ -1.382e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.86□□□□□ -1.472e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.46□□□□□ -1.542e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.46□□□□□ -1.542e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.682e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.43□□□□□ -1.72e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.832e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.5□□□□□ -1.852e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.872e-6■■□□□ 12.8
KHDRBS1Q07666 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.882e-6■■□□□ 12.8
KHDRBS1Q07666 CPED1-209ENST00000520801 553 ntTSL 49.49□□□□□ -0.891e-6■■□□□ 12.7
KHDRBS1Q07666 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.023e-7■■□□□ 12.6
KHDRBS1Q07666 CHKA-206ENST00000531341 524 ntTSL 317.15■□□□□ 0.343e-7■■□□□ 12.6
KHDRBS1Q07666 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.143e-7■■□□□ 12.6
KHDRBS1Q07666 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.083e-7■■□□□ 12.6
KHDRBS1Q07666 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.023e-7■■□□□ 12.6
KHDRBS1Q07666 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.133e-7■■□□□ 12.6
KHDRBS1Q07666 NDUFAB1-203ENST00000562133 503 ntTSL 213.69□□□□□ -0.223e-7■■□□□ 12.6
KHDRBS1Q07666 NDUFAB1-202ENST00000484769 843 ntTSL 311.81□□□□□ -0.523e-7■■□□□ 12.6
KHDRBS1Q07666 WDR33-205ENST00000436787 822 ntTSL 511.49□□□□□ -0.573e-7■■□□□ 12.6
KHDRBS1Q07666 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC10.02□□□□□ -0.813e-7■■□□□ 12.6
KHDRBS1Q07666 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.969e-7■■□□□ 12.6
KHDRBS1Q07666 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.319e-7■■□□□ 12.6
KHDRBS1Q07666 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.923e-6■■□□□ 12.6
KHDRBS1Q07666 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.533e-6■■□□□ 12.6
KHDRBS1Q07666 AC087235.1-201ENST00000538297 1329 ntTSL 1 (best) BASIC9.68□□□□□ -0.862e-6■■□□□ 12.6
KHDRBS1Q07666 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.026e-7■■□□□ 12.5
KHDRBS1Q07666 SNRNP40-204ENST00000474025 581 ntTSL 34.11□□□□□ -1.756e-7■■□□□ 12.5
KHDRBS1Q07666 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.575e-7■■□□□ 12.4
KHDRBS1Q07666 UBE3C-207ENST00000494532 543 ntTSL 212.57□□□□□ -0.45e-7■■□□□ 12.4
KHDRBS1Q07666 UBE3C-205ENST00000470408 5197 ntTSL 29.57□□□□□ -0.885e-7■■□□□ 12.4
KHDRBS1Q07666 CPED1-204ENST00000428526 2219 ntTSL 26.97□□□□□ -1.291e-6■■□□□ 12.4
KHDRBS1Q07666 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.25□□□□□ -1.571e-6■■□□□ 12.4
KHDRBS1Q07666 AC015574.1-203ENST00000614344 498 ntTSL 53.95□□□□□ -1.781e-6■■□□□ 12.4
KHDRBS1Q07666 AC015574.1-204ENST00000612595 512 ntTSL 53.95□□□□□ -1.781e-6■■□□□ 12.4
KHDRBS1Q07666 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.034e-7■■□□□ 12.4
KHDRBS1Q07666 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.52□□□□□ -0.094e-7■■□□□ 12.4
KHDRBS1Q07666 C22orf39-204ENST00000509549 2979 ntTSL 211.08□□□□□ -0.647e-7■■□□□ 12.3
KHDRBS1Q07666 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.196e-8■■□□□ 12.3
KHDRBS1Q07666 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.556e-8■■□□□ 12.3
KHDRBS1Q07666 PHF10-204ENST00000480008 4285 ntTSL 1 (best)15.77■□□□□ 0.116e-8■■□□□ 12.3
KHDRBS1Q07666 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.47□□□□□ -0.096e-8■■□□□ 12.3
KHDRBS1Q07666 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.436e-8■■□□□ 12.3
KHDRBS1Q07666 USP15-206ENST00000546718 559 ntTSL 211.79□□□□□ -0.526e-8■■□□□ 12.3
KHDRBS1Q07666 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.673e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-221ENST00000513121 573 ntTSL 216.18■□□□□ 0.183e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-208ENST00000504045 1530 ntTSL 514.41□□□□□ -0.13e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-222ENST00000513678 444 ntTSL 214.19□□□□□ -0.143e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-235ENST00000506147 580 ntTSL 414.09□□□□□ -0.153e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-220ENST00000512876 575 ntTSL 314.07□□□□□ -0.163e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-213ENST00000508689 561 ntTSL 413.96□□□□□ -0.173e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-225ENST00000514528 532 ntTSL 413.74□□□□□ -0.213e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-239ENST00000514694 587 ntTSL 413.4□□□□□ -0.263e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-238ENST00000512107 579 ntTSL 412.79□□□□□ -0.363e-7■■□□□ 12.2
KHDRBS1Q07666 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)12.74□□□□□ -0.373e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.21□□□□□ -0.453e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.523e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.613e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-231ENST00000502394 589 ntTSL 410.83□□□□□ -0.683e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-236ENST00000509644 750 ntTSL 310.55□□□□□ -0.723e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-234ENST00000505016 664 ntTSL 210.16□□□□□ -0.783e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.083e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-205ENST00000503340 696 ntTSL 37.93□□□□□ -1.143e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.183e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.57□□□□□ -1.23e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-224ENST00000514488 564 ntTSL 47.08□□□□□ -1.283e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-207ENST00000504023 770 ntTSL 46.88□□□□□ -1.313e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.71□□□□□ -1.333e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-212ENST00000507860 571 ntTSL 46.67□□□□□ -1.343e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-210ENST00000504643 2560 ntTSL 26.46□□□□□ -1.383e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.53e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-218ENST00000511978 573 ntTSL 35.47□□□□□ -1.533e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-216ENST00000511249 447 ntTSL 45.42□□□□□ -1.543e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.11□□□□□ -1.593e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-214ENST00000509918 377 ntTSL 44.88□□□□□ -1.633e-7■■□□□ 12.2
KHDRBS1Q07666 MATR3-209ENST00000504311 423 ntTSL 34.86□□□□□ -1.633e-7■■□□□ 12.2
KHDRBS1Q07666 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.82□□□□□ -0.362e-6■■□□□ 12.2
KHDRBS1Q07666 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.027e-7■■□□□ 12.1
KHDRBS1Q07666 NSMCE2-203ENST00000517532 841 ntTSL 57.79□□□□□ -1.167e-7■■□□□ 12.1
KHDRBS1Q07666 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.467e-7■■□□□ 12.1
KHDRBS1Q07666 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.15□□□□□ -1.597e-7■■□□□ 12.1
KHDRBS1Q07666 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.09□□□□□ -1.759e-7■■□□□ 12.1
KHDRBS1Q07666 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.46e-10■■□□□ 12.1
KHDRBS1Q07666 CNPY2-207ENST00000551276 556 ntTSL 516.74■□□□□ 0.276e-10■■□□□ 12.1
KHDRBS1Q07666 AC073896.1-203ENST00000548360 512 ntTSL 416.74■□□□□ 0.276e-10■■□□□ 12.1
KHDRBS1Q07666 CNPY2-210ENST00000551720 586 ntTSL 316.74■□□□□ 0.276e-10■■□□□ 12.1
KHDRBS1Q07666 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.046e-10■■□□□ 12.1
KHDRBS1Q07666 CNPY2-206ENST00000548013 817 ntTSL 1 (best)15.11■□□□□ 0.016e-10■■□□□ 12.1
Retrieved 100 of 2,417 protein–RNA pairs in 129.7 ms