RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
NSMCE2-202ENST00000517315 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
NSMCE2-202ENST00000517315 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
NSMCE2-202ENST00000517315 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
NSMCE2-202ENST00000517315 FOXD1Q16676 465 aa19.03■□□□□ 0.64
NSMCE2-202ENST00000517315 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
NSMCE2-202ENST00000517315 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
NSMCE2-202ENST00000517315 ADRA2BP18089 450 aa18.12■□□□□ 0.49
NSMCE2-202ENST00000517315 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
NSMCE2-202ENST00000517315 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
NSMCE2-202ENST00000517315 MSH5O43196 834 aa17.62■□□□□ 0.41
NSMCE2-202ENST00000517315 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
NSMCE2-202ENST00000517315 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
NSMCE2-202ENST00000517315 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
NSMCE2-202ENST00000517315 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
NSMCE2-202ENST00000517315 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
NSMCE2-202ENST00000517315 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
NSMCE2-202ENST00000517315 KCNA4P22459 653 aa15.93■□□□□ 0.14
NSMCE2-202ENST00000517315 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
NSMCE2-202ENST00000517315 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
NSMCE2-202ENST00000517315 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.12
NSMCE2-202ENST00000517315 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
NSMCE2-202ENST00000517315 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
NSMCE2-202ENST00000517315 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
NSMCE2-202ENST00000517315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
NSMCE2-202ENST00000517315 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
NSMCE2-202ENST00000517315 RNF39Q9H2S5 420 aa15.08■□□□□ 0
NSMCE2-202ENST00000517315 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
NSMCE2-202ENST00000517315 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
NSMCE2-202ENST00000517315 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
NSMCE2-202ENST00000517315 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
NSMCE2-202ENST00000517315 ZBTB22O15209 634 aa14.66□□□□□ -0.06
NSMCE2-202ENST00000517315 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
NSMCE2-202ENST00000517315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
NSMCE2-202ENST00000517315 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
NSMCE2-202ENST00000517315 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
NSMCE2-202ENST00000517315 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
NSMCE2-202ENST00000517315 CAPN15O75808 1086 aa14.47□□□□□ -0.09
NSMCE2-202ENST00000517315 APLP2Q06481 763 aa14.47□□□□□ -0.09
NSMCE2-202ENST00000517315 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
NSMCE2-202ENST00000517315 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
NSMCE2-202ENST00000517315 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
NSMCE2-202ENST00000517315 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
NSMCE2-202ENST00000517315 DSG3P32926 999 aa14.28□□□□□ -0.12
NSMCE2-202ENST00000517315 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
NSMCE2-202ENST00000517315 ABCB7O75027 752 aa14.2□□□□□ -0.14
NSMCE2-202ENST00000517315 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
NSMCE2-202ENST00000517315 POLA2Q14181 598 aa14.06□□□□□ -0.16
NSMCE2-202ENST00000517315 POTEHQ6S545 545 aa14.04□□□□□ -0.16
NSMCE2-202ENST00000517315 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
NSMCE2-202ENST00000517315 FBLN2P98095 1184 aa13.66□□□□□ -0.22
NSMCE2-202ENST00000517315 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
NSMCE2-202ENST00000517315 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
NSMCE2-202ENST00000517315 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
NSMCE2-202ENST00000517315 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
NSMCE2-202ENST00000517315 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
NSMCE2-202ENST00000517315 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
NSMCE2-202ENST00000517315 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
NSMCE2-202ENST00000517315 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
NSMCE2-202ENST00000517315 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
NSMCE2-202ENST00000517315 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
NSMCE2-202ENST00000517315 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
NSMCE2-202ENST00000517315 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
NSMCE2-202ENST00000517315 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
NSMCE2-202ENST00000517315 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
NSMCE2-202ENST00000517315 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
NSMCE2-202ENST00000517315 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
NSMCE2-202ENST00000517315 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
NSMCE2-202ENST00000517315 FKBP8Q14318 412 aa13.02□□□□□ -0.33
NSMCE2-202ENST00000517315 PROM2Q8N271 834 aa12.96□□□□□ -0.33
NSMCE2-202ENST00000517315 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
NSMCE2-202ENST00000517315 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
NSMCE2-202ENST00000517315 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
NSMCE2-202ENST00000517315 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
NSMCE2-202ENST00000517315 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
NSMCE2-202ENST00000517315 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
NSMCE2-202ENST00000517315 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
NSMCE2-202ENST00000517315 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
NSMCE2-202ENST00000517315 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
NSMCE2-202ENST00000517315 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
NSMCE2-202ENST00000517315 HAX1O00165 279 aa12.57□□□□□ -0.4
NSMCE2-202ENST00000517315 MIER1Q8N108 512 aa12.54□□□□□ -0.4
NSMCE2-202ENST00000517315 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
NSMCE2-202ENST00000517315 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
NSMCE2-202ENST00000517315 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
NSMCE2-202ENST00000517315 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
NSMCE2-202ENST00000517315 EVX2Q03828 476 aa12.46□□□□□ -0.41
NSMCE2-202ENST00000517315 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
NSMCE2-202ENST00000517315 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
NSMCE2-202ENST00000517315 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
NSMCE2-202ENST00000517315 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
NSMCE2-202ENST00000517315 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
NSMCE2-202ENST00000517315 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
NSMCE2-202ENST00000517315 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
NSMCE2-202ENST00000517315 NUBP1P53384 320 aa12.26□□□□□ -0.45
NSMCE2-202ENST00000517315 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
NSMCE2-202ENST00000517315 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
NSMCE2-202ENST00000517315 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
NSMCE2-202ENST00000517315 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
NSMCE2-202ENST00000517315 GABBR2O75899 941 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms