RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
USP15-206ENST00000546718 ABCC9O60706 1549 aa33.44■■■□□ 2.94
USP15-206ENST00000546718 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
USP15-206ENST00000546718 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
USP15-206ENST00000546718 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
USP15-206ENST00000546718 NACADO15069 1562 aa31.44■■■□□ 2.62
USP15-206ENST00000546718 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
USP15-206ENST00000546718 UNC13AQ9UPW8 1703 aa31.08■■■□□ 2.57
USP15-206ENST00000546718 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
USP15-206ENST00000546718 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
USP15-206ENST00000546718 BICRAQ9NZM4 1560 aa30.88■■■□□ 2.53
USP15-206ENST00000546718 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
USP15-206ENST00000546718 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
USP15-206ENST00000546718 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
USP15-206ENST00000546718 SCRIBQ14160 1630 aa30.28■■■□□ 2.44
USP15-206ENST00000546718 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
USP15-206ENST00000546718 CECR2Q9BXF3 1484 aa30.14■■■□□ 2.42
USP15-206ENST00000546718 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
USP15-206ENST00000546718 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
USP15-206ENST00000546718 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
USP15-206ENST00000546718 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
USP15-206ENST00000546718 CUX2O14529 1486 aa28.91■■■□□ 2.22
USP15-206ENST00000546718 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
USP15-206ENST00000546718 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
USP15-206ENST00000546718 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
USP15-206ENST00000546718 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
USP15-206ENST00000546718 NESP48681 1621 aa28.69■■■□□ 2.18
USP15-206ENST00000546718 BAZ1AQ9NRL2 1556 aaPredicted RBP28.65■■■□□ 2.18
USP15-206ENST00000546718 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
USP15-206ENST00000546718 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
USP15-206ENST00000546718 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
USP15-206ENST00000546718 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
USP15-206ENST00000546718 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
USP15-206ENST00000546718 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
USP15-206ENST00000546718 PDS5BQ9NTI5 1447 aa28.22■■■□□ 2.11
USP15-206ENST00000546718 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
USP15-206ENST00000546718 WIZO95785 1651 aa28.1■■■□□ 2.09
USP15-206ENST00000546718 MRC2Q9UBG0 1479 aa28.04■■■□□ 2.08
USP15-206ENST00000546718 WDR62O43379 1518 aa28.02■■■□□ 2.08
USP15-206ENST00000546718 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
USP15-206ENST00000546718 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.04
USP15-206ENST00000546718 CFTRP13569 1480 aa27.78■■■□□ 2.04
USP15-206ENST00000546718 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
USP15-206ENST00000546718 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
USP15-206ENST00000546718 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
USP15-206ENST00000546718 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
USP15-206ENST00000546718 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
USP15-206ENST00000546718 PRDM2Q13029 1718 aa27.52■■■□□ 2
USP15-206ENST00000546718 OSCARQ8IYS5 282 aa27.46■■□□□ 1.99
USP15-206ENST00000546718 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
USP15-206ENST00000546718 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
USP15-206ENST00000546718 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
USP15-206ENST00000546718 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
USP15-206ENST00000546718 RIMBP3CA6NJZ7 1639 aa27.26■■□□□ 1.95
USP15-206ENST00000546718 RIMBP3BA6NNM3 1639 aa27.26■■□□□ 1.95
USP15-206ENST00000546718 RIMBP3Q9UFD9 1639 aa27.26■■□□□ 1.95
USP15-206ENST00000546718 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
USP15-206ENST00000546718 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
USP15-206ENST00000546718 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
USP15-206ENST00000546718 ARHGEF11O15085 1522 aa27.14■■□□□ 1.94
USP15-206ENST00000546718 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
USP15-206ENST00000546718 CHD1O14646 1710 aa27.03■■□□□ 1.92
USP15-206ENST00000546718 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.923e-11■□□□□ 9.5
USP15-206ENST00000546718 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
USP15-206ENST00000546718 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.9
USP15-206ENST00000546718 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
USP15-206ENST00000546718 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
USP15-206ENST00000546718 FBLN2P98095 1184 aa26.81■■□□□ 1.88
USP15-206ENST00000546718 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
USP15-206ENST00000546718 SOGA1O94964 1423 aa26.81■■□□□ 1.88
USP15-206ENST00000546718 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
USP15-206ENST00000546718 WDR97A6NE52 1622 aa26.77■■□□□ 1.88
USP15-206ENST00000546718 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
USP15-206ENST00000546718 CUX1P39880 1505 aa26.75■■□□□ 1.87
USP15-206ENST00000546718 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
USP15-206ENST00000546718 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
USP15-206ENST00000546718 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
USP15-206ENST00000546718 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
USP15-206ENST00000546718 TRHP20396 242 aaPredicted RBP26.6■■□□□ 1.85
USP15-206ENST00000546718 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
USP15-206ENST00000546718 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
USP15-206ENST00000546718 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
USP15-206ENST00000546718 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
USP15-206ENST00000546718 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
USP15-206ENST00000546718 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
USP15-206ENST00000546718 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
USP15-206ENST00000546718 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
USP15-206ENST00000546718 ERCC6L2Q5T890 1561 aa26.3■■□□□ 1.8
USP15-206ENST00000546718 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
USP15-206ENST00000546718 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
USP15-206ENST00000546718 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
USP15-206ENST00000546718 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
USP15-206ENST00000546718 NUP160Q12769 1436 aa26.24■■□□□ 1.79
USP15-206ENST00000546718 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
USP15-206ENST00000546718 SHROOM2Q13796 1616 aa26.19■■□□□ 1.78
USP15-206ENST00000546718 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
USP15-206ENST00000546718 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
USP15-206ENST00000546718 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
USP15-206ENST00000546718 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
USP15-206ENST00000546718 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms