RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
NSMCE2-201ENST00000287437 ABCC9O60706 1549 aa24.91■■□□□ 1.58
NSMCE2-201ENST00000287437 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
NSMCE2-201ENST00000287437 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
NSMCE2-201ENST00000287437 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
NSMCE2-201ENST00000287437 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
NSMCE2-201ENST00000287437 NACADO15069 1562 aa23.32■■□□□ 1.32
NSMCE2-201ENST00000287437 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
NSMCE2-201ENST00000287437 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
NSMCE2-201ENST00000287437 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
NSMCE2-201ENST00000287437 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
NSMCE2-201ENST00000287437 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
NSMCE2-201ENST00000287437 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
NSMCE2-201ENST00000287437 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
NSMCE2-201ENST00000287437 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
NSMCE2-201ENST00000287437 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
NSMCE2-201ENST00000287437 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
NSMCE2-201ENST00000287437 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
NSMCE2-201ENST00000287437 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
NSMCE2-201ENST00000287437 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
NSMCE2-201ENST00000287437 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
NSMCE2-201ENST00000287437 NCAPD3P42695 1498 aa21.55■■□□□ 1.04
NSMCE2-201ENST00000287437 CUX2O14529 1486 aa21.53■■□□□ 1.04
NSMCE2-201ENST00000287437 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
NSMCE2-201ENST00000287437 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
NSMCE2-201ENST00000287437 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
NSMCE2-201ENST00000287437 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
NSMCE2-201ENST00000287437 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
NSMCE2-201ENST00000287437 NESP48681 1621 aa21.33■■□□□ 1
NSMCE2-201ENST00000287437 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
NSMCE2-201ENST00000287437 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
NSMCE2-201ENST00000287437 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
NSMCE2-201ENST00000287437 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
NSMCE2-201ENST00000287437 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
NSMCE2-201ENST00000287437 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
NSMCE2-201ENST00000287437 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
NSMCE2-201ENST00000287437 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
NSMCE2-201ENST00000287437 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
NSMCE2-201ENST00000287437 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
NSMCE2-201ENST00000287437 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
NSMCE2-201ENST00000287437 WDR62O43379 1518 aa20.79■□□□□ 0.92
NSMCE2-201ENST00000287437 WIZO95785 1651 aa20.79■□□□□ 0.92
NSMCE2-201ENST00000287437 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
NSMCE2-201ENST00000287437 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
NSMCE2-201ENST00000287437 CFTRP13569 1480 aa20.6■□□□□ 0.89
NSMCE2-201ENST00000287437 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
NSMCE2-201ENST00000287437 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.87
NSMCE2-201ENST00000287437 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
NSMCE2-201ENST00000287437 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
NSMCE2-201ENST00000287437 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
NSMCE2-201ENST00000287437 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
NSMCE2-201ENST00000287437 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
NSMCE2-201ENST00000287437 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
NSMCE2-201ENST00000287437 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
NSMCE2-201ENST00000287437 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
NSMCE2-201ENST00000287437 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
NSMCE2-201ENST00000287437 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
NSMCE2-201ENST00000287437 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
NSMCE2-201ENST00000287437 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
NSMCE2-201ENST00000287437 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
NSMCE2-201ENST00000287437 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
NSMCE2-201ENST00000287437 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
NSMCE2-201ENST00000287437 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
NSMCE2-201ENST00000287437 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
NSMCE2-201ENST00000287437 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
NSMCE2-201ENST00000287437 CHD1O14646 1710 aa20.05■□□□□ 0.8
NSMCE2-201ENST00000287437 FBLN2P98095 1184 aa20.02■□□□□ 0.8
NSMCE2-201ENST00000287437 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
NSMCE2-201ENST00000287437 ARAP1Q96P48 1450 aa20■□□□□ 0.79
NSMCE2-201ENST00000287437 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
NSMCE2-201ENST00000287437 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
NSMCE2-201ENST00000287437 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
NSMCE2-201ENST00000287437 SOGA1O94964 1423 aa19.92■□□□□ 0.78
NSMCE2-201ENST00000287437 SNAPC4Q5SXM2 1469 aa19.88■□□□□ 0.77
NSMCE2-201ENST00000287437 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
NSMCE2-201ENST00000287437 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
NSMCE2-201ENST00000287437 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
NSMCE2-201ENST00000287437 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
NSMCE2-201ENST00000287437 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
NSMCE2-201ENST00000287437 CUX1P39880 1505 aa19.81■□□□□ 0.76
NSMCE2-201ENST00000287437 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
NSMCE2-201ENST00000287437 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
NSMCE2-201ENST00000287437 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
NSMCE2-201ENST00000287437 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
NSMCE2-201ENST00000287437 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
NSMCE2-201ENST00000287437 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
NSMCE2-201ENST00000287437 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
NSMCE2-201ENST00000287437 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
NSMCE2-201ENST00000287437 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
NSMCE2-201ENST00000287437 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
NSMCE2-201ENST00000287437 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
NSMCE2-201ENST00000287437 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
NSMCE2-201ENST00000287437 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
NSMCE2-201ENST00000287437 NUP160Q12769 1436 aa19.46■□□□□ 0.71
NSMCE2-201ENST00000287437 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
NSMCE2-201ENST00000287437 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
NSMCE2-201ENST00000287437 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
NSMCE2-201ENST00000287437 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
NSMCE2-201ENST00000287437 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
NSMCE2-201ENST00000287437 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms