RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 AEBP2Q6ZN18 517 aaPredicted RBP31.33■■■□□ 2.61
AC087235.1-201ENST00000538297 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
AC087235.1-201ENST00000538297 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
AC087235.1-201ENST00000538297 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
AC087235.1-201ENST00000538297 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.78
AC087235.1-201ENST00000538297 FOXD1Q16676 465 aa25.06■■□□□ 1.6
AC087235.1-201ENST00000538297 POTEDQ86YR6 584 aa23.86■■□□□ 1.41
AC087235.1-201ENST00000538297 MSH5O43196 834 aa23.69■■□□□ 1.38
AC087235.1-201ENST00000538297 PIAS4Q8N2W9 510 aaPredicted RBP23.35■■□□□ 1.33
AC087235.1-201ENST00000538297 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
AC087235.1-201ENST00000538297 CCDC180Q9P1Z9 1646 aa23.2■■□□□ 1.3
AC087235.1-201ENST00000538297 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
AC087235.1-201ENST00000538297 ADRA2BP18089 450 aa22.97■■□□□ 1.27
AC087235.1-201ENST00000538297 ABCC9O60706 1549 aa22.32■■□□□ 1.16
AC087235.1-201ENST00000538297 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
AC087235.1-201ENST00000538297 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
AC087235.1-201ENST00000538297 NACADO15069 1562 aa21.79■■□□□ 1.08
AC087235.1-201ENST00000538297 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
AC087235.1-201ENST00000538297 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
AC087235.1-201ENST00000538297 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
AC087235.1-201ENST00000538297 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
AC087235.1-201ENST00000538297 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
AC087235.1-201ENST00000538297 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
AC087235.1-201ENST00000538297 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
AC087235.1-201ENST00000538297 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
AC087235.1-201ENST00000538297 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
AC087235.1-201ENST00000538297 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
AC087235.1-201ENST00000538297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
AC087235.1-201ENST00000538297 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
AC087235.1-201ENST00000538297 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
AC087235.1-201ENST00000538297 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
AC087235.1-201ENST00000538297 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
AC087235.1-201ENST00000538297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
AC087235.1-201ENST00000538297 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
AC087235.1-201ENST00000538297 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
AC087235.1-201ENST00000538297 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
AC087235.1-201ENST00000538297 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
AC087235.1-201ENST00000538297 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
AC087235.1-201ENST00000538297 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
AC087235.1-201ENST00000538297 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
AC087235.1-201ENST00000538297 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
AC087235.1-201ENST00000538297 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
AC087235.1-201ENST00000538297 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
AC087235.1-201ENST00000538297 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.8
AC087235.1-201ENST00000538297 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
AC087235.1-201ENST00000538297 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
AC087235.1-201ENST00000538297 HMGXB3Q12766 1538 aa20■□□□□ 0.79
AC087235.1-201ENST00000538297 RNF216Q9NWF9 866 aaPredicted RBP19.99■□□□□ 0.79
AC087235.1-201ENST00000538297 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
AC087235.1-201ENST00000538297 WIZO95785 1651 aa19.89■□□□□ 0.77
AC087235.1-201ENST00000538297 C1QBPQ07021 282 aaKnown RBP19.83■□□□□ 0.77
AC087235.1-201ENST00000538297 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
AC087235.1-201ENST00000538297 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
AC087235.1-201ENST00000538297 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
AC087235.1-201ENST00000538297 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
AC087235.1-201ENST00000538297 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
AC087235.1-201ENST00000538297 CFTRP13569 1480 aa19.45■□□□□ 0.7
AC087235.1-201ENST00000538297 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
AC087235.1-201ENST00000538297 PDS5BQ9NTI5 1447 aa19.41■□□□□ 0.7
AC087235.1-201ENST00000538297 NESP48681 1621 aa19.36■□□□□ 0.69
AC087235.1-201ENST00000538297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
AC087235.1-201ENST00000538297 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
AC087235.1-201ENST00000538297 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
AC087235.1-201ENST00000538297 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
AC087235.1-201ENST00000538297 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
AC087235.1-201ENST00000538297 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
AC087235.1-201ENST00000538297 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
AC087235.1-201ENST00000538297 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
AC087235.1-201ENST00000538297 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
AC087235.1-201ENST00000538297 CUX2O14529 1486 aa19.06■□□□□ 0.64
AC087235.1-201ENST00000538297 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
AC087235.1-201ENST00000538297 WDR62O43379 1518 aa19.03■□□□□ 0.64
AC087235.1-201ENST00000538297 URB2Q14146 1524 aaKnown RBP18.98■□□□□ 0.63
AC087235.1-201ENST00000538297 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
AC087235.1-201ENST00000538297 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
AC087235.1-201ENST00000538297 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
AC087235.1-201ENST00000538297 CUX1P39880 1505 aa18.87■□□□□ 0.61
AC087235.1-201ENST00000538297 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.61
AC087235.1-201ENST00000538297 TOP2BQ02880 1626 aa18.83■□□□□ 0.6
AC087235.1-201ENST00000538297 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
AC087235.1-201ENST00000538297 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
AC087235.1-201ENST00000538297 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
AC087235.1-201ENST00000538297 SOGA1O94964 1423 aa18.78■□□□□ 0.6
AC087235.1-201ENST00000538297 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
AC087235.1-201ENST00000538297 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
AC087235.1-201ENST00000538297 CAPN15O75808 1086 aa18.74■□□□□ 0.59
AC087235.1-201ENST00000538297 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
AC087235.1-201ENST00000538297 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
AC087235.1-201ENST00000538297 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
AC087235.1-201ENST00000538297 DSG3P32926 999 aa18.7■□□□□ 0.58
AC087235.1-201ENST00000538297 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
AC087235.1-201ENST00000538297 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
AC087235.1-201ENST00000538297 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
AC087235.1-201ENST00000538297 POTEHQ6S545 545 aa18.64■□□□□ 0.57
AC087235.1-201ENST00000538297 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.57
AC087235.1-201ENST00000538297 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
AC087235.1-201ENST00000538297 AQRO60306 1485 aaKnown RBP eCLIP18.55■□□□□ 0.56
AC087235.1-201ENST00000538297 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
AC087235.1-201ENST00000538297 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
AC087235.1-201ENST00000538297 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms