RNA–Protein interactions for RNA: ENST00000522563.5

NSMCE2-210, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NSMCE2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-210ENST00000522563 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
NSMCE2-210ENST00000522563 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
NSMCE2-210ENST00000522563 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
NSMCE2-210ENST00000522563 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
NSMCE2-210ENST00000522563 PLPPR3Q6T4P5 718 aa25.19■■□□□ 1.62
NSMCE2-210ENST00000522563 FOXD1Q16676 465 aa25.13■■□□□ 1.61
NSMCE2-210ENST00000522563 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
NSMCE2-210ENST00000522563 ADRA2BP18089 450 aa24.19■■□□□ 1.46
NSMCE2-210ENST00000522563 PIAS4Q8N2W9 510 aaPredicted RBP23.65■■□□□ 1.38
NSMCE2-210ENST00000522563 MSH5O43196 834 aa23.05■■□□□ 1.28
NSMCE2-210ENST00000522563 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
NSMCE2-210ENST00000522563 MAPK8IP2Q13387 824 aaPredicted RBP21.98■■□□□ 1.11
NSMCE2-210ENST00000522563 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
NSMCE2-210ENST00000522563 KCNA4P22459 653 aa21.79■■□□□ 1.08
NSMCE2-210ENST00000522563 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
NSMCE2-210ENST00000522563 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
NSMCE2-210ENST00000522563 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
NSMCE2-210ENST00000522563 NPM3O75607 178 aaKnown RBP21.37■■□□□ 1.01
NSMCE2-210ENST00000522563 RNF216Q9NWF9 866 aaPredicted RBP21.16■□□□□ 0.98
NSMCE2-210ENST00000522563 POTEDQ86YR6 584 aa21.12■□□□□ 0.97
NSMCE2-210ENST00000522563 HOXD11P31277 338 aaPredicted RBP21.1■□□□□ 0.97
NSMCE2-210ENST00000522563 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
NSMCE2-210ENST00000522563 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
NSMCE2-210ENST00000522563 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
NSMCE2-210ENST00000522563 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
NSMCE2-210ENST00000522563 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
NSMCE2-210ENST00000522563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
NSMCE2-210ENST00000522563 ZBTB22O15209 634 aa20.09■□□□□ 0.81
NSMCE2-210ENST00000522563 FOXD4L1Q9NU39 408 aa19.97■□□□□ 0.79
NSMCE2-210ENST00000522563 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
NSMCE2-210ENST00000522563 U3KPZ7 1027 aaPredicted RBP19.83■□□□□ 0.77
NSMCE2-210ENST00000522563 RNF39Q9H2S5 420 aa19.82■□□□□ 0.76
NSMCE2-210ENST00000522563 MYCNP04198 464 aaPredicted RBP19.68■□□□□ 0.74
NSMCE2-210ENST00000522563 C1QBPQ07021 282 aaKnown RBP19.52■□□□□ 0.72
NSMCE2-210ENST00000522563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
NSMCE2-210ENST00000522563 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
NSMCE2-210ENST00000522563 SAMD1Q6SPF0 538 aaPredicted RBP19.39■□□□□ 0.69
NSMCE2-210ENST00000522563 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
NSMCE2-210ENST00000522563 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
NSMCE2-210ENST00000522563 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
NSMCE2-210ENST00000522563 ATXN8OSP0DMR3 200 aa19.2■□□□□ 0.66
NSMCE2-210ENST00000522563 APLP2Q06481 763 aa19.18■□□□□ 0.66
NSMCE2-210ENST00000522563 CAPN15O75808 1086 aa19.17■□□□□ 0.66
NSMCE2-210ENST00000522563 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
NSMCE2-210ENST00000522563 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
NSMCE2-210ENST00000522563 ABCB7O75027 752 aa18.87■□□□□ 0.61
NSMCE2-210ENST00000522563 DSG3P32926 999 aa18.87■□□□□ 0.61
NSMCE2-210ENST00000522563 POLA2Q14181 598 aa18.78■□□□□ 0.6
NSMCE2-210ENST00000522563 MKRN4PQ13434 485 aaPredicted RBP18.43■□□□□ 0.54
NSMCE2-210ENST00000522563 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
NSMCE2-210ENST00000522563 FBLN2P98095 1184 aa18.31■□□□□ 0.52
NSMCE2-210ENST00000522563 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
NSMCE2-210ENST00000522563 FKBP8Q14318 412 aa17.98■□□□□ 0.47
NSMCE2-210ENST00000522563 SPDYE4A6NLX3 237 aa17.93■□□□□ 0.46
NSMCE2-210ENST00000522563 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
NSMCE2-210ENST00000522563 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
NSMCE2-210ENST00000522563 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
NSMCE2-210ENST00000522563 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
NSMCE2-210ENST00000522563 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
NSMCE2-210ENST00000522563 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
NSMCE2-210ENST00000522563 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
NSMCE2-210ENST00000522563 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
NSMCE2-210ENST00000522563 PROM2Q8N271 834 aa17.64■□□□□ 0.41
NSMCE2-210ENST00000522563 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
NSMCE2-210ENST00000522563 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
NSMCE2-210ENST00000522563 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
NSMCE2-210ENST00000522563 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
NSMCE2-210ENST00000522563 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
NSMCE2-210ENST00000522563 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
NSMCE2-210ENST00000522563 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
NSMCE2-210ENST00000522563 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
NSMCE2-210ENST00000522563 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
NSMCE2-210ENST00000522563 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
NSMCE2-210ENST00000522563 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
NSMCE2-210ENST00000522563 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
NSMCE2-210ENST00000522563 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
NSMCE2-210ENST00000522563 MIER1Q8N108 512 aa17■□□□□ 0.31
NSMCE2-210ENST00000522563 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
NSMCE2-210ENST00000522563 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
NSMCE2-210ENST00000522563 IFNLR1Q8IU57 520 aaPredicted RBP16.89■□□□□ 0.29
NSMCE2-210ENST00000522563 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
NSMCE2-210ENST00000522563 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
NSMCE2-210ENST00000522563 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
NSMCE2-210ENST00000522563 FARP1Q9Y4F1 1045 aaPredicted RBP16.77■□□□□ 0.28
NSMCE2-210ENST00000522563 POTEHQ6S545 545 aa16.7■□□□□ 0.26
NSMCE2-210ENST00000522563 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
NSMCE2-210ENST00000522563 NPM1P06748 294 aaKnown RBP eCLIP16.62■□□□□ 0.25
NSMCE2-210ENST00000522563 SPOCK2Q92563 424 aa16.62■□□□□ 0.25
NSMCE2-210ENST00000522563 NUBP1P53384 320 aa16.61■□□□□ 0.25
NSMCE2-210ENST00000522563 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
NSMCE2-210ENST00000522563 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
NSMCE2-210ENST00000522563 HAX1O00165 279 aa16.45■□□□□ 0.22
NSMCE2-210ENST00000522563 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
NSMCE2-210ENST00000522563 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
NSMCE2-210ENST00000522563 EVX2Q03828 476 aa16.43■□□□□ 0.22
NSMCE2-210ENST00000522563 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
NSMCE2-210ENST00000522563 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
NSMCE2-210ENST00000522563 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
NSMCE2-210ENST00000522563 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
NSMCE2-210ENST00000522563 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms