Protein–RNA interactions for Protein: P59998

ARPC4, Actin-related protein 2/3 complex subunit 4, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4P59998 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARPC4P59998 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
ARPC4P59998 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ARPC4P59998 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.01■□□□□ 0.95
ARPC4P59998 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARPC4P59998 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 AC145676.1-201ENST00000514988 2004 ntBASIC21■□□□□ 0.95
ARPC4P59998 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ARPC4P59998 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ARPC4P59998 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ARPC4P59998 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARPC4P59998 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARPC4P59998 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.99■□□□□ 0.95
ARPC4P59998 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.99■□□□□ 0.95
ARPC4P59998 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.99■□□□□ 0.95
ARPC4P59998 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ARPC4P59998 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARPC4P59998 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ARPC4P59998 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARPC4P59998 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARPC4P59998 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARPC4P59998 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ARPC4P59998 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.97■□□□□ 0.95
ARPC4P59998 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARPC4P59998 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ARPC4P59998 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARPC4P59998 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.97■□□□□ 0.95
ARPC4P59998 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.97■□□□□ 0.95
ARPC4P59998 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.97■□□□□ 0.95
ARPC4P59998 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARPC4P59998 WHAMMP2-203ENST00000563942 1603 ntBASIC20.96■□□□□ 0.95
ARPC4P59998 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.96■□□□□ 0.95
ARPC4P59998 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARPC4P59998 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ARPC4P59998 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.96■□□□□ 0.95
ARPC4P59998 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.95■□□□□ 0.94
ARPC4P59998 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARPC4P59998 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.95■□□□□ 0.94
ARPC4P59998 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ARPC4P59998 RNF165-205ENST00000588679 2904 ntBASIC20.94■□□□□ 0.94
ARPC4P59998 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.94■□□□□ 0.94
ARPC4P59998 SLC25A24-204ENST00000569674 2357 ntBASIC20.94■□□□□ 0.94
ARPC4P59998 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ARPC4P59998 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.94■□□□□ 0.94
ARPC4P59998 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.94■□□□□ 0.94
ARPC4P59998 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
ARPC4P59998 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARPC4P59998 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ARPC4P59998 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.93■□□□□ 0.94
ARPC4P59998 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.93■□□□□ 0.94
ARPC4P59998 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARPC4P59998 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.93■□□□□ 0.94
ARPC4P59998 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARPC4P59998 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARPC4P59998 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
ARPC4P59998 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARPC4P59998 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARPC4P59998 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARPC4P59998 AC108673.1-201ENST00000510422 1159 ntBASIC20.91■□□□□ 0.94
ARPC4P59998 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARPC4P59998 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.9■□□□□ 0.94
ARPC4P59998 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 AC005559.1-201ENST00000589661 871 ntBASIC20.9■□□□□ 0.94
ARPC4P59998 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARPC4P59998 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.9■□□□□ 0.94
ARPC4P59998 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARPC4P59998 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ARPC4P59998 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARPC4P59998 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARPC4P59998 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
ARPC4P59998 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.88■□□□□ 0.93
ARPC4P59998 AC068473.5-201ENST00000616428 2072 ntBASIC20.88■□□□□ 0.93
ARPC4P59998 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ARPC4P59998 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ARPC4P59998 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARPC4P59998 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARPC4P59998 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARPC4P59998 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARPC4P59998 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms