Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SLC6A12P48065 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC6A12P48065 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC6A12P48065 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A12P48065 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC6A12P48065 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A12P48065 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A12P48065 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A12P48065 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
SLC6A12P48065 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SLC6A12P48065 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 AC092296.2-201ENST00000589470 999 ntBASIC23.61■■□□□ 1.37
SLC6A12P48065 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC6A12P48065 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ERN1-208ENST00000606895 2068 ntBASIC23.6■■□□□ 1.37
SLC6A12P48065 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A12P48065 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A12P48065 AC025884.2-201ENST00000553429 711 ntBASIC23.59■■□□□ 1.37
SLC6A12P48065 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SLC6A12P48065 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A12P48065 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC6A12P48065 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A12P48065 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.58■■□□□ 1.37
SLC6A12P48065 AC010501.1-201ENST00000606270 1962 ntBASIC23.58■■□□□ 1.36
SLC6A12P48065 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A12P48065 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.56■■□□□ 1.36
SLC6A12P48065 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SLC6A12P48065 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A12P48065 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A12P48065 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SLC6A12P48065 AC022413.1-201ENST00000624602 984 ntBASIC23.55■■□□□ 1.36
SLC6A12P48065 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC6A12P48065 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC6A12P48065 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A12P48065 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A12P48065 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.54■■□□□ 1.36
SLC6A12P48065 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.54■■□□□ 1.36
SLC6A12P48065 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A12P48065 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC6A12P48065 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.52■■□□□ 1.36
SLC6A12P48065 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SLC6A12P48065 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 ECEL1P2-201ENST00000461596 1295 ntBASIC23.51■■□□□ 1.35
SLC6A12P48065 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.51■■□□□ 1.35
SLC6A12P48065 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.5■■□□□ 1.35
SLC6A12P48065 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC6A12P48065 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SLC6A12P48065 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 SMPD5-203ENST00000639008 1464 ntBASIC23.49■■□□□ 1.35
SLC6A12P48065 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A12P48065 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A12P48065 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms