Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.68■■□□□ 1.38
CDH3P22223 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.68■■□□□ 1.38
CDH3P22223 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH3P22223 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH3P22223 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.67■■□□□ 1.38
CDH3P22223 AL449106.1-201ENST00000608517 1980 ntBASIC23.67■■□□□ 1.38
CDH3P22223 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH3P22223 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH3P22223 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.67■■□□□ 1.38
CDH3P22223 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CDH3P22223 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDH3P22223 AC133552.2-201ENST00000619106 1032 ntBASIC23.67■■□□□ 1.38
CDH3P22223 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CDH3P22223 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
CDH3P22223 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDH3P22223 AC093536.1-201ENST00000569153 554 ntBASIC23.66■■□□□ 1.38
CDH3P22223 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.66■■□□□ 1.38
CDH3P22223 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CDH3P22223 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDH3P22223 AC009831.1-201ENST00000580420 1582 ntBASIC23.65■■□□□ 1.38
CDH3P22223 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.65■■□□□ 1.38
CDH3P22223 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDH3P22223 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDH3P22223 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH3P22223 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDH3P22223 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH3P22223 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH3P22223 KRT18P60-201ENST00000312876 1297 ntBASIC23.64■■□□□ 1.37
CDH3P22223 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.64■■□□□ 1.37
CDH3P22223 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.64■■□□□ 1.37
CDH3P22223 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH3P22223 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH3P22223 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH3P22223 AC026202.3-201ENST00000600805 1127 ntBASIC23.63■■□□□ 1.37
CDH3P22223 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CDH3P22223 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CDH3P22223 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.62■■□□□ 1.37
CDH3P22223 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.62■■□□□ 1.37
CDH3P22223 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH3P22223 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH3P22223 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.62■■□□□ 1.37
CDH3P22223 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH3P22223 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH3P22223 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH3P22223 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH3P22223 AL592293.1-201ENST00000502889 1188 ntBASIC23.61■■□□□ 1.37
CDH3P22223 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CDH3P22223 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH3P22223 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH3P22223 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH3P22223 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDH3P22223 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
CDH3P22223 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CDH3P22223 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH3P22223 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH3P22223 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH3P22223 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH3P22223 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDH3P22223 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDH3P22223 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDH3P22223 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.58■■□□□ 1.37
CDH3P22223 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDH3P22223 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CDH3P22223 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDH3P22223 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDH3P22223 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDH3P22223 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.57■■□□□ 1.36
CDH3P22223 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.57■■□□□ 1.36
CDH3P22223 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH3P22223 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH3P22223 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.56■■□□□ 1.36
CDH3P22223 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDH3P22223 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH3P22223 AL033527.3-201ENST00000566366 1196 ntBASIC23.56■■□□□ 1.36
CDH3P22223 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDH3P22223 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH3P22223 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CDH3P22223 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.56■■□□□ 1.36
CDH3P22223 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDH3P22223 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.55■■□□□ 1.36
CDH3P22223 RAP2CP1-202ENST00000605179 643 ntBASIC23.55■■□□□ 1.36
CDH3P22223 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDH3P22223 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CDH3P22223 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.54■■□□□ 1.36
CDH3P22223 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDH3P22223 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDH3P22223 AC004987.1-201ENST00000428627 508 ntBASIC23.54■■□□□ 1.36
CDH3P22223 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH3P22223 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH3P22223 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDH3P22223 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH3P22223 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.53■■□□□ 1.36
CDH3P22223 TSPY13P-201ENST00000338964 914 ntBASIC23.53■■□□□ 1.36
CDH3P22223 ATP5G2P3-201ENST00000429083 425 ntBASIC23.53■■□□□ 1.36
CDH3P22223 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDH3P22223 AC129492.7-201ENST00000622992 756 ntBASIC23.53■■□□□ 1.36
CDH3P22223 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH3P22223 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.52■■□□□ 1.36
CDH3P22223 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDH3P22223 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms