Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC012354.3-201ENST00000623734 483 ntBASIC23.87■■□□□ 1.41
NELFEP18615 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
NELFEP18615 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.86■■□□□ 1.41
NELFEP18615 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
NELFEP18615 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NELFEP18615 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.85■■□□□ 1.41
NELFEP18615 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.85■■□□□ 1.41
NELFEP18615 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.85■■□□□ 1.41
NELFEP18615 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
NELFEP18615 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NELFEP18615 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.85■■□□□ 1.41
NELFEP18615 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
NELFEP18615 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.84■■□□□ 1.41
NELFEP18615 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 AC007029.1-201ENST00000604183 313 ntBASIC23.84■■□□□ 1.41
NELFEP18615 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NELFEP18615 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NELFEP18615 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.83■■□□□ 1.41
NELFEP18615 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.83■■□□□ 1.41
NELFEP18615 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NELFEP18615 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NELFEP18615 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
NELFEP18615 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.83■■□□□ 1.4
NELFEP18615 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 SMPD5-203ENST00000639008 1464 ntBASIC23.82■■□□□ 1.4
NELFEP18615 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NELFEP18615 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NELFEP18615 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NELFEP18615 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NELFEP18615 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NELFEP18615 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
NELFEP18615 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.8■■□□□ 1.4
NELFEP18615 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NELFEP18615 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NELFEP18615 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NELFEP18615 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.8■■□□□ 1.4
NELFEP18615 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NELFEP18615 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NELFEP18615 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.79■■□□□ 1.4
NELFEP18615 KRT18P60-201ENST00000312876 1297 ntBASIC23.79■■□□□ 1.4
NELFEP18615 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NELFEP18615 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NELFEP18615 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.79■■□□□ 1.4
NELFEP18615 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NELFEP18615 AC025884.2-201ENST00000553429 711 ntBASIC23.78■■□□□ 1.4
NELFEP18615 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NELFEP18615 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.78■■□□□ 1.4
NELFEP18615 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NELFEP18615 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NELFEP18615 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
NELFEP18615 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.77■■□□□ 1.4
NELFEP18615 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NELFEP18615 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NELFEP18615 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.77■■□□□ 1.4
NELFEP18615 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NELFEP18615 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.76■■□□□ 1.39
NELFEP18615 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.76■■□□□ 1.39
NELFEP18615 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.75■■□□□ 1.39
NELFEP18615 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NELFEP18615 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
NELFEP18615 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.75■■□□□ 1.39
NELFEP18615 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NELFEP18615 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NELFEP18615 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NELFEP18615 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NELFEP18615 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.73■■□□□ 1.39
NELFEP18615 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
NELFEP18615 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NELFEP18615 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NELFEP18615 AL033527.3-201ENST00000566366 1196 ntBASIC23.73■■□□□ 1.39
NELFEP18615 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.73■■□□□ 1.39
NELFEP18615 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NELFEP18615 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
NELFEP18615 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.73■■□□□ 1.39
NELFEP18615 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.73■■□□□ 1.39
NELFEP18615 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.72■■□□□ 1.39
NELFEP18615 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NELFEP18615 AC133552.2-201ENST00000619106 1032 ntBASIC23.72■■□□□ 1.39
NELFEP18615 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.72■■□□□ 1.39
NELFEP18615 AC009831.1-201ENST00000580420 1582 ntBASIC23.72■■□□□ 1.39
NELFEP18615 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NELFEP18615 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.71■■□□□ 1.39
NELFEP18615 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NELFEP18615 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.71■■□□□ 1.39
NELFEP18615 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
NELFEP18615 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NELFEP18615 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms