Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.4■□□□□ 0.86
HLA-AP01891 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-AP01891 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-AP01891 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HLA-AP01891 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-AP01891 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-AP01891 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
HLA-AP01891 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-AP01891 AC005559.1-201ENST00000589661 871 ntBASIC20.39■□□□□ 0.85
HLA-AP01891 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-AP01891 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-AP01891 AC138932.3-201ENST00000567634 1902 ntBASIC20.39■□□□□ 0.85
HLA-AP01891 AC022211.4-201ENST00000625094 2161 ntBASIC20.38■□□□□ 0.85
HLA-AP01891 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-AP01891 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-AP01891 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-AP01891 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-AP01891 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HLA-AP01891 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HLA-AP01891 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-AP01891 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-AP01891 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
HLA-AP01891 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HLA-AP01891 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-AP01891 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
HLA-AP01891 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-AP01891 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-AP01891 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-AP01891 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-AP01891 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-AP01891 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.35■□□□□ 0.85
HLA-AP01891 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-AP01891 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-AP01891 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-AP01891 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.34■□□□□ 0.85
HLA-AP01891 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-AP01891 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-AP01891 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-AP01891 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-AP01891 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-AP01891 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-AP01891 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-AP01891 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-AP01891 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-AP01891 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-AP01891 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-AP01891 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-AP01891 DUX4L28-201ENST00000623687 678 ntBASIC20.32■□□□□ 0.84
HLA-AP01891 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HLA-AP01891 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HLA-AP01891 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-AP01891 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-AP01891 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-AP01891 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HLA-AP01891 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 AC012676.1-201ENST00000574705 1949 ntBASIC20.3■□□□□ 0.84
HLA-AP01891 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-AP01891 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-AP01891 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-AP01891 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-AP01891 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-AP01891 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-AP01891 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-AP01891 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-AP01891 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-AP01891 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-AP01891 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-AP01891 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-AP01891 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-AP01891 AL162393.1-201ENST00000437852 946 ntBASIC20.28■□□□□ 0.84
HLA-AP01891 MIR3665-201ENST00000578708 105 ntBASIC20.28■□□□□ 0.84
HLA-AP01891 AP006261.1-201ENST00000584783 668 ntBASIC20.28■□□□□ 0.84
HLA-AP01891 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.28■□□□□ 0.84
HLA-AP01891 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms