Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NPC1O15118 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NPC1O15118 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPC1O15118 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPC1O15118 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPC1O15118 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPC1O15118 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.81■■□□□ 1.56
NPC1O15118 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.8■■□□□ 1.56
NPC1O15118 AC010980.1-201ENST00000587192 1142 ntBASIC24.8■■□□□ 1.56
NPC1O15118 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPC1O15118 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPC1O15118 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPC1O15118 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.79■■□□□ 1.56
NPC1O15118 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NPC1O15118 LINC01003-201ENST00000564834 1764 ntBASIC24.79■■□□□ 1.56
NPC1O15118 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPC1O15118 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.79■■□□□ 1.56
NPC1O15118 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
NPC1O15118 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPC1O15118 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPC1O15118 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
NPC1O15118 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.77■■□□□ 1.56
NPC1O15118 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NPC1O15118 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.77■■□□□ 1.56
NPC1O15118 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NPC1O15118 AC142086.6-201ENST00000621154 1765 ntBASIC24.77■■□□□ 1.56
NPC1O15118 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.76■■□□□ 1.55
NPC1O15118 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
NPC1O15118 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NPC1O15118 KRT18P10-201ENST00000388836 1287 ntBASIC24.76■■□□□ 1.55
NPC1O15118 YBX1P4-201ENST00000392794 808 ntBASIC24.76■■□□□ 1.55
NPC1O15118 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.76■■□□□ 1.55
NPC1O15118 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPC1O15118 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
NPC1O15118 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NPC1O15118 AC019171.1-201ENST00000601251 1056 ntBASIC24.74■■□□□ 1.55
NPC1O15118 AL449106.1-201ENST00000608517 1980 ntBASIC24.73■■□□□ 1.55
NPC1O15118 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
NPC1O15118 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NPC1O15118 MIR4508-201ENST00000584178 70 ntBASIC24.73■■□□□ 1.55
NPC1O15118 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
NPC1O15118 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
NPC1O15118 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.72■■□□□ 1.55
NPC1O15118 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPC1O15118 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NPC1O15118 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.72■■□□□ 1.55
NPC1O15118 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.72■■□□□ 1.55
NPC1O15118 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPC1O15118 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.72■■□□□ 1.55
NPC1O15118 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NPC1O15118 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.72■■□□□ 1.55
NPC1O15118 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.71■■□□□ 1.55
NPC1O15118 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NPC1O15118 AL035685.1-201ENST00000636663 812 ntBASIC24.71■■□□□ 1.55
NPC1O15118 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPC1O15118 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPC1O15118 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
NPC1O15118 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.7■■□□□ 1.54
NPC1O15118 AC087393.1-201ENST00000582896 145 ntBASIC24.7■■□□□ 1.54
NPC1O15118 AL451085.2-201ENST00000605085 799 ntBASIC24.7■■□□□ 1.54
NPC1O15118 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPC1O15118 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.7■■□□□ 1.54
NPC1O15118 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
NPC1O15118 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.69■■□□□ 1.54
NPC1O15118 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPC1O15118 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPC1O15118 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPC1O15118 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NPC1O15118 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPC1O15118 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.68■■□□□ 1.54
NPC1O15118 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPC1O15118 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPC1O15118 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.67■■□□□ 1.54
NPC1O15118 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NPC1O15118 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NPC1O15118 AC103834.1-201ENST00000520383 144 ntBASIC24.67■■□□□ 1.54
NPC1O15118 PVT1_1.1-201ENST00000615125 194 ntBASIC24.67■■□□□ 1.54
NPC1O15118 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
NPC1O15118 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NPC1O15118 KRT8P33-201ENST00000508125 1423 ntBASIC24.67■■□□□ 1.54
NPC1O15118 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
NPC1O15118 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NPC1O15118 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NPC1O15118 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
NPC1O15118 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.66■■□□□ 1.54
NPC1O15118 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NPC1O15118 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NPC1O15118 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.66■■□□□ 1.54
NPC1O15118 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NPC1O15118 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.65■■□□□ 1.54
NPC1O15118 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NPC1O15118 RPS2P7-201ENST00000447334 885 ntBASIC24.65■■□□□ 1.54
NPC1O15118 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.65■■□□□ 1.54
NPC1O15118 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NPC1O15118 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.65■■□□□ 1.54
NPC1O15118 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NPC1O15118 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NPC1O15118 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.64■■□□□ 1.54
NPC1O15118 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
NPC1O15118 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms