Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM235A6NFC5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TMEM235A6NFC5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM235A6NFC5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM235A6NFC5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM235A6NFC5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM235A6NFC5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM235A6NFC5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM235A6NFC5 AL139125.2-201ENST00000623134 1869 ntBASIC20.62■□□□□ 0.89
TMEM235A6NFC5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TMEM235A6NFC5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.62■□□□□ 0.89
TMEM235A6NFC5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM235A6NFC5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM235A6NFC5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM235A6NFC5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM235A6NFC5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM235A6NFC5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM235A6NFC5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM235A6NFC5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM235A6NFC5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.56■□□□□ 0.88
TMEM235A6NFC5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 AC096887.2-201ENST00000623443 1957 ntBASIC20.56■□□□□ 0.88
TMEM235A6NFC5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM235A6NFC5 AC087741.3-201ENST00000624270 1347 ntBASIC20.55■□□□□ 0.88
TMEM235A6NFC5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM235A6NFC5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM235A6NFC5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM235A6NFC5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM235A6NFC5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TMEM235A6NFC5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms