Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM90A16PA6NEW6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM90A16PA6NEW6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM90A16PA6NEW6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM90A16PA6NEW6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FAM90A16PA6NEW6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM90A16PA6NEW6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM90A16PA6NEW6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM90A16PA6NEW6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.52■□□□□ 0.87
FAM90A16PA6NEW6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 ERN1-208ENST00000606895 2068 ntBASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM90A16PA6NEW6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 AL359258.2-201ENST00000564063 1566 ntBASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM90A16PA6NEW6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM90A16PA6NEW6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM90A16PA6NEW6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 HLA-V-202ENST00000446817 847 ntBASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FAM90A16PA6NEW6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
FAM90A16PA6NEW6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FAM90A16PA6NEW6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
FAM90A16PA6NEW6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FAM90A16PA6NEW6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
FAM90A16PA6NEW6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FAM90A16PA6NEW6 MIR3648-2-201ENST00000581792 180 ntBASIC20.46■□□□□ 0.87
FAM90A16PA6NEW6 MIR3648-1-201ENST00000615959 180 ntBASIC20.46■□□□□ 0.87
FAM90A16PA6NEW6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FAM90A16PA6NEW6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FAM90A16PA6NEW6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
FAM90A16PA6NEW6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FAM90A16PA6NEW6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 AC126177.7-201ENST00000547904 679 ntBASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 CR559946.2-201ENST00000623684 991 ntBASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 AL359504.2-201ENST00000605506 1601 ntBASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FAM90A16PA6NEW6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FAM90A16PA6NEW6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.42■□□□□ 0.86
FAM90A16PA6NEW6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
FAM90A16PA6NEW6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
FAM90A16PA6NEW6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM90A16PA6NEW6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM90A16PA6NEW6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 AC142381.3-201ENST00000568208 1670 ntBASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
FAM90A16PA6NEW6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FAM90A16PA6NEW6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.4■□□□□ 0.86
FAM90A16PA6NEW6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FAM90A16PA6NEW6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
FAM90A16PA6NEW6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FAM90A16PA6NEW6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FAM90A16PA6NEW6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
FAM90A16PA6NEW6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 AC096887.2-201ENST00000623443 1957 ntBASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.38■□□□□ 0.85
FAM90A16PA6NEW6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms