Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-2A0A0B4J235 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-2A0A0B4J235 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-2A0A0B4J235 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-2A0A0B4J235 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV13-2A0A0B4J235 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 LINC00543-201ENST00000567234 1845 ntBASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-2A0A0B4J235 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-2A0A0B4J235 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-2A0A0B4J235 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 AC142472.1-201ENST00000612013 1741 ntBASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 AC010501.1-201ENST00000606270 1962 ntBASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-2A0A0B4J235 WHAMMP3-201ENST00000611636 1609 ntBASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 AC022211.4-201ENST00000625094 2161 ntBASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-2A0A0B4J235 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-2A0A0B4J235 AC138932.3-201ENST00000567634 1902 ntBASIC15.96■□□□□ 0.14
TRAV13-2A0A0B4J235 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV13-2A0A0B4J235 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 AC079834.2-201ENST00000609776 1949 ntBASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV13-2A0A0B4J235 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV13-2A0A0B4J235 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TRAV13-2A0A0B4J235 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-2A0A0B4J235 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV13-2A0A0B4J235 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms