Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GNL3-211ENST00000496254 2118 ntTSL 54.39□□□□□ -1.711e-8■□□□□ 8.8
SRSF1Q07955 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.324e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.7□□□□□ -0.384e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-208ENST00000546652 823 ntTSL 510.9□□□□□ -0.664e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.84e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-217ENST00000550520 753 ntTSL 310.05□□□□□ -0.84e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-226ENST00000562264 1145 ntTSL 510.05□□□□□ -0.84e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC9.93□□□□□ -0.824e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.944e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.974e-6■□□□□ 8.8
SRSF1Q07955 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC9□□□□□ -0.974e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.014e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.034e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.5□□□□□ -1.054e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC8.12□□□□□ -1.114e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.114e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-221ENST00000551104 681 ntTSL 37.9□□□□□ -1.144e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-216ENST00000550192 734 ntTSL 47.37□□□□□ -1.234e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-220ENST00000550910 449 ntTSL 34.54□□□□□ -1.684e-6■□□□□ 8.8
SRSF1Q07955 PCBP2-224ENST00000552980 527 ntTSL 33.46□□□□□ -1.864e-6■□□□□ 8.8
SRSF1Q07955 NARF-207ENST00000577410 873 ntTSL 523.6■■□□□ 1.372e-8■□□□□ 8.7
SRSF1Q07955 NARF-221ENST00000583181 505 ntTSL 518.81■□□□□ 0.62e-8■□□□□ 8.7
SRSF1Q07955 NARF-216ENST00000581202 1013 ntTSL 518.11■□□□□ 0.492e-8■□□□□ 8.7
SRSF1Q07955 NARF-224ENST00000584411 525 ntTSL 416.33■□□□□ 0.22e-8■□□□□ 8.7
SRSF1Q07955 NARF-217ENST00000581743 785 ntTSL 516.2■□□□□ 0.182e-8■□□□□ 8.7
SRSF1Q07955 NARF-218ENST00000581795 1430 ntTSL 215.85■□□□□ 0.132e-8■□□□□ 8.7
SRSF1Q07955 NARF-213ENST00000579198 599 ntTSL 515.37■□□□□ 0.052e-8■□□□□ 8.7
SRSF1Q07955 NARF-214ENST00000580296 733 ntTSL 314.59□□□□□ -0.072e-8■□□□□ 8.7
SRSF1Q07955 NARF-210ENST00000578082 841 ntTSL 413.87□□□□□ -0.192e-8■□□□□ 8.7
SRSF1Q07955 NARF-223ENST00000584192 495 ntTSL 313.1□□□□□ -0.312e-8■□□□□ 8.7
SRSF1Q07955 NARF-215ENST00000580748 577 ntTSL 510.1□□□□□ -0.792e-8■□□□□ 8.7
SRSF1Q07955 AC138932.1-201ENST00000534164 6830 ntBASIC15.66■□□□□ 0.12e-11■□□□□ 8.7
SRSF1Q07955 NPIPA1-203ENST00000472413 5345 ntTSL 212.96□□□□□ -0.342e-11■□□□□ 8.7
SRSF1Q07955 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.084e-6■□□□□ 8.7
SRSF1Q07955 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.114e-6■□□□□ 8.7
SRSF1Q07955 MARCH3-202ENST00000502289 764 ntTSL 418.15■□□□□ 0.52e-6■□□□□ 8.7
SRSF1Q07955 IDH1-206ENST00000451391 563 ntTSL 317.69■□□□□ 0.422e-6■□□□□ 8.7
SRSF1Q07955 IDH1-202ENST00000415282 942 ntTSL 217.25■□□□□ 0.352e-6■□□□□ 8.7
SRSF1Q07955 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-6■□□□□ 8.7
SRSF1Q07955 AFDN-212ENST00000476946 867 ntTSL 214.21□□□□□ -0.132e-6■□□□□ 8.7
SRSF1Q07955 IDH1-204ENST00000417583 702 ntTSL 412.99□□□□□ -0.332e-6■□□□□ 8.7
SRSF1Q07955 IDH1-208ENST00000481557 556 ntTSL 211.71□□□□□ -0.532e-6■□□□□ 8.7
SRSF1Q07955 IDH1-207ENST00000462386 1614 ntTSL 210.97□□□□□ -0.652e-6■□□□□ 8.7
SRSF1Q07955 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.752e-6■□□□□ 8.7
SRSF1Q07955 BRD8-218ENST00000471892 687 ntTSL 39.88□□□□□ -0.832e-6■□□□□ 8.7
SRSF1Q07955 BRD8-213ENST00000453824 561 ntTSL 59.44□□□□□ -0.92e-6■□□□□ 8.7
SRSF1Q07955 BRD8-212ENST00000450756 590 ntTSL 49.12□□□□□ -0.952e-6■□□□□ 8.7
SRSF1Q07955 IDH1-201ENST00000345146 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.992e-6■□□□□ 8.7
SRSF1Q07955 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.182e-6■□□□□ 8.7
SRSF1Q07955 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.342e-6■□□□□ 8.7
SRSF1Q07955 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.24□□□□□ -1.412e-6■□□□□ 8.7
SRSF1Q07955 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.16□□□□□ -1.422e-6■□□□□ 8.7
SRSF1Q07955 BRD8-214ENST00000454473 3005 ntTSL 55.87□□□□□ -1.472e-6■□□□□ 8.7
SRSF1Q07955 BRD8-211ENST00000441656 2899 ntTSL 55.85□□□□□ -1.472e-6■□□□□ 8.7
SRSF1Q07955 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.82□□□□□ -1.482e-6■□□□□ 8.7
SRSF1Q07955 BRD8-224ENST00000512140 2876 ntTSL 25.65□□□□□ -1.52e-6■□□□□ 8.7
SRSF1Q07955 BRD8-206ENST00000425764 546 ntTSL 45.62□□□□□ -1.512e-6■□□□□ 8.7
SRSF1Q07955 BRD8-208ENST00000428808 754 ntTSL 45.62□□□□□ -1.512e-6■□□□□ 8.7
SRSF1Q07955 BRD8-226ENST00000515254 557 ntTSL 25.62□□□□□ -1.512e-6■□□□□ 8.7
SRSF1Q07955 BRD8-210ENST00000432618 956 ntTSL 45.31□□□□□ -1.562e-6■□□□□ 8.7
SRSF1Q07955 BRD8-205ENST00000418329 2912 ntTSL 55.03□□□□□ -1.62e-6■□□□□ 8.7
SRSF1Q07955 NBAS-204ENST00000427792 442 ntTSL 23.21□□□□□ -1.92e-6■□□□□ 8.7
SRSF1Q07955 CNBP-209ENST00000507573 641 ntTSL 212.55□□□□□ -0.46e-8■□□□□ 8.7
SRSF1Q07955 DBNL-218ENST00000485932 553 ntTSL 419.78■□□□□ 0.762e-8■□□□□ 8.7
SRSF1Q07955 DBNL-209ENST00000441904 878 ntTSL 319.54■□□□□ 0.722e-8■□□□□ 8.7
SRSF1Q07955 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.84■□□□□ 0.612e-8■□□□□ 8.7
SRSF1Q07955 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.33■□□□□ 0.532e-8■□□□□ 8.7
SRSF1Q07955 DBNL-205ENST00000439815 561 ntTSL 417.78■□□□□ 0.442e-8■□□□□ 8.7
SRSF1Q07955 DBNL-216ENST00000464762 693 ntTSL 517.05■□□□□ 0.322e-8■□□□□ 8.7
SRSF1Q07955 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-8■□□□□ 8.7
SRSF1Q07955 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.232e-8■□□□□ 8.7
SRSF1Q07955 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.21■□□□□ 0.192e-8■□□□□ 8.7
SRSF1Q07955 DBNL-201ENST00000411855 1447 ntTSL 216.08■□□□□ 0.162e-8■□□□□ 8.7
SRSF1Q07955 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.07■□□□□ 0.162e-8■□□□□ 8.7
SRSF1Q07955 DBNL-208ENST00000441840 1854 ntTSL 516■□□□□ 0.152e-8■□□□□ 8.7
SRSF1Q07955 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.12e-8■□□□□ 8.7
SRSF1Q07955 DBNL-222ENST00000498733 1401 ntTSL 215.48■□□□□ 0.072e-8■□□□□ 8.7
SRSF1Q07955 DBNL-203ENST00000429716 1622 ntTSL 215.02□□□□□ -0.012e-8■□□□□ 8.7
SRSF1Q07955 DBNL-211ENST00000449997 2169 ntTSL 214.8□□□□□ -0.042e-8■□□□□ 8.7
SRSF1Q07955 DBNL-221ENST00000497184 4090 ntTSL 1 (best)10.32□□□□□ -0.762e-8■□□□□ 8.7
SRSF1Q07955 DBNL-204ENST00000432854 9618 ntTSL 59.96□□□□□ -0.822e-8■□□□□ 8.7
SRSF1Q07955 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.15□□□□□ -0.463e-9■□□□□ 8.7
SRSF1Q07955 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.873e-9■□□□□ 8.7
SRSF1Q07955 FTCD-206ENST00000460011 1260 ntTSL 1 (best)18.07■□□□□ 0.483e-7■□□□□ 8.7
SRSF1Q07955 FARP1-231ENST00000600648 433 ntTSL 520.78■□□□□ 0.929e-10■□□□□ 8.7
SRSF1Q07955 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.419e-10■□□□□ 8.7
SRSF1Q07955 RNF40-203ENST00000493683 5371 ntTSL 216.85■□□□□ 0.299e-10■□□□□ 8.7
SRSF1Q07955 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC8.13□□□□□ -1.119e-10■□□□□ 8.7
SRSF1Q07955 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC7.83□□□□□ -1.169e-10■□□□□ 8.7
SRSF1Q07955 BCR-212ENST00000479188 658 ntTSL 413.66□□□□□ -0.229e-7■□□□□ 8.7
SRSF1Q07955 BCR-207ENST00000463770 168 ntTSL 1 (best)13.05□□□□□ -0.329e-7■□□□□ 8.7
SRSF1Q07955 BCR-214ENST00000487679 231 ntTSL 1 (best)8.14□□□□□ -1.119e-7■□□□□ 8.7
SRSF1Q07955 CIRBP-231ENST00000591097 1507 ntTSL 1 (best)21.37■■□□□ 1.011e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.971e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-224ENST00000589686 532 ntTSL 219.66■□□□□ 0.741e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.5■□□□□ 0.711e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-226ENST00000590171 905 ntTSL 319.5■□□□□ 0.711e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-234ENST00000591659 587 ntTSL 219.5■□□□□ 0.711e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.18■□□□□ 0.661e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-229ENST00000590704 1456 ntTSL 219.16■□□□□ 0.661e-12■□□□□ 8.7
Retrieved 100 of 14,836 protein–RNA pairs in 231.2 ms