RNA–Protein interactions for RNA: ENST00000546463.5

PCBP2-207, Transcript of poly(rC) binding protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCBP2, Length 1,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-207ENST00000546463 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
PCBP2-207ENST00000546463 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.01
PCBP2-207ENST00000546463 ABCC9O60706 1549 aa21.22■□□□□ 0.99
PCBP2-207ENST00000546463 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.84
PCBP2-207ENST00000546463 NACADO15069 1562 aa20.13■□□□□ 0.81
PCBP2-207ENST00000546463 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
PCBP2-207ENST00000546463 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
PCBP2-207ENST00000546463 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
PCBP2-207ENST00000546463 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
PCBP2-207ENST00000546463 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
PCBP2-207ENST00000546463 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
PCBP2-207ENST00000546463 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
PCBP2-207ENST00000546463 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
PCBP2-207ENST00000546463 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
PCBP2-207ENST00000546463 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
PCBP2-207ENST00000546463 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
PCBP2-207ENST00000546463 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
PCBP2-207ENST00000546463 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
PCBP2-207ENST00000546463 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
PCBP2-207ENST00000546463 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
PCBP2-207ENST00000546463 NCAPD3P42695 1498 aa18.52■□□□□ 0.56
PCBP2-207ENST00000546463 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
PCBP2-207ENST00000546463 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
PCBP2-207ENST00000546463 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
PCBP2-207ENST00000546463 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
PCBP2-207ENST00000546463 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
PCBP2-207ENST00000546463 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
PCBP2-207ENST00000546463 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
PCBP2-207ENST00000546463 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
PCBP2-207ENST00000546463 NESP48681 1621 aa18.26■□□□□ 0.51
PCBP2-207ENST00000546463 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
PCBP2-207ENST00000546463 CUX2O14529 1486 aa18.23■□□□□ 0.51
PCBP2-207ENST00000546463 WIZO95785 1651 aa18.18■□□□□ 0.5
PCBP2-207ENST00000546463 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
PCBP2-207ENST00000546463 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
PCBP2-207ENST00000546463 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
PCBP2-207ENST00000546463 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
PCBP2-207ENST00000546463 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
PCBP2-207ENST00000546463 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
PCBP2-207ENST00000546463 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
PCBP2-207ENST00000546463 TOP2AP11388 1531 aaKnown RBP17.94■□□□□ 0.46
PCBP2-207ENST00000546463 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
PCBP2-207ENST00000546463 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
PCBP2-207ENST00000546463 WDR62O43379 1518 aa17.84■□□□□ 0.45
PCBP2-207ENST00000546463 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
PCBP2-207ENST00000546463 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
PCBP2-207ENST00000546463 CFTRP13569 1480 aa17.81■□□□□ 0.44
PCBP2-207ENST00000546463 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
PCBP2-207ENST00000546463 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
PCBP2-207ENST00000546463 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
PCBP2-207ENST00000546463 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
PCBP2-207ENST00000546463 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
PCBP2-207ENST00000546463 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
PCBP2-207ENST00000546463 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
PCBP2-207ENST00000546463 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
PCBP2-207ENST00000546463 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
PCBP2-207ENST00000546463 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
PCBP2-207ENST00000546463 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
PCBP2-207ENST00000546463 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
PCBP2-207ENST00000546463 CHD1O14646 1710 aa17.29■□□□□ 0.36
PCBP2-207ENST00000546463 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
PCBP2-207ENST00000546463 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■■■■ 27.2
PCBP2-207ENST00000546463 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
PCBP2-207ENST00000546463 CUX1P39880 1505 aa17.24■□□□□ 0.35
PCBP2-207ENST00000546463 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
PCBP2-207ENST00000546463 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
PCBP2-207ENST00000546463 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
PCBP2-207ENST00000546463 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
PCBP2-207ENST00000546463 SOGA1O94964 1423 aa17.21■□□□□ 0.35
PCBP2-207ENST00000546463 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
PCBP2-207ENST00000546463 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
PCBP2-207ENST00000546463 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
PCBP2-207ENST00000546463 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
PCBP2-207ENST00000546463 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
PCBP2-207ENST00000546463 FBLN2P98095 1184 aa17.12■□□□□ 0.33
PCBP2-207ENST00000546463 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
PCBP2-207ENST00000546463 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PCBP2-207ENST00000546463 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
PCBP2-207ENST00000546463 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
PCBP2-207ENST00000546463 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
PCBP2-207ENST00000546463 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
PCBP2-207ENST00000546463 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
PCBP2-207ENST00000546463 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
PCBP2-207ENST00000546463 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
PCBP2-207ENST00000546463 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
PCBP2-207ENST00000546463 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
PCBP2-207ENST00000546463 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
PCBP2-207ENST00000546463 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
PCBP2-207ENST00000546463 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
PCBP2-207ENST00000546463 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
PCBP2-207ENST00000546463 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
PCBP2-207ENST00000546463 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
PCBP2-207ENST00000546463 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
PCBP2-207ENST00000546463 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
PCBP2-207ENST00000546463 NUP160Q12769 1436 aa16.78■□□□□ 0.28
PCBP2-207ENST00000546463 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
PCBP2-207ENST00000546463 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
PCBP2-207ENST00000546463 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
PCBP2-207ENST00000546463 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
PCBP2-207ENST00000546463 CUL7Q14999 1698 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms