RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
NPIPA1-203ENST00000472413 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
NPIPA1-203ENST00000472413 SUPT5HO00267 1087 aaKnown RBP26.36■■□□□ 1.81
NPIPA1-203ENST00000472413 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
NPIPA1-203ENST00000472413 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
NPIPA1-203ENST00000472413 APLP2Q06481 763 aa25.24■■□□□ 1.63
NPIPA1-203ENST00000472413 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
NPIPA1-203ENST00000472413 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
NPIPA1-203ENST00000472413 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.5
NPIPA1-203ENST00000472413 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
NPIPA1-203ENST00000472413 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
NPIPA1-203ENST00000472413 TTBK1Q5TCY1 1321 aaPredicted RBP24.32■■□□□ 1.48
NPIPA1-203ENST00000472413 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
NPIPA1-203ENST00000472413 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
NPIPA1-203ENST00000472413 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
NPIPA1-203ENST00000472413 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
NPIPA1-203ENST00000472413 ABCC9O60706 1549 aa23.79■■□□□ 1.4
NPIPA1-203ENST00000472413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
NPIPA1-203ENST00000472413 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
NPIPA1-203ENST00000472413 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
NPIPA1-203ENST00000472413 MYT1LQ9UL68 1186 aa23.57■■□□□ 1.36
NPIPA1-203ENST00000472413 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■□□□□ 9.6
NPIPA1-203ENST00000472413 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
NPIPA1-203ENST00000472413 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
NPIPA1-203ENST00000472413 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.34
NPIPA1-203ENST00000472413 ITGAEP38570 1179 aa23.31■■□□□ 1.32
NPIPA1-203ENST00000472413 NEFLP07196 543 aa23.27■■□□□ 1.32
NPIPA1-203ENST00000472413 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
NPIPA1-203ENST00000472413 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
NPIPA1-203ENST00000472413 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
NPIPA1-203ENST00000472413 HRCP23327 699 aa22.97■■□□□ 1.27
NPIPA1-203ENST00000472413 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
NPIPA1-203ENST00000472413 FBLN2P98095 1184 aa22.92■■□□□ 1.26
NPIPA1-203ENST00000472413 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
NPIPA1-203ENST00000472413 MYT1Q01538 1121 aa22.86■■□□□ 1.25
NPIPA1-203ENST00000472413 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
NPIPA1-203ENST00000472413 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
NPIPA1-203ENST00000472413 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
NPIPA1-203ENST00000472413 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
NPIPA1-203ENST00000472413 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
NPIPA1-203ENST00000472413 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
NPIPA1-203ENST00000472413 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
NPIPA1-203ENST00000472413 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.2
NPIPA1-203ENST00000472413 DAXXQ9UER7 740 aaPredicted RBP22.54■■□□□ 1.2
NPIPA1-203ENST00000472413 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
NPIPA1-203ENST00000472413 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
NPIPA1-203ENST00000472413 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
NPIPA1-203ENST00000472413 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
NPIPA1-203ENST00000472413 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
NPIPA1-203ENST00000472413 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
NPIPA1-203ENST00000472413 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
NPIPA1-203ENST00000472413 ZNF777Q9ULD5 760 aaPredicted RBP22.33■■□□□ 1.16
NPIPA1-203ENST00000472413 ESF1Q9H501 851 aaKnown RBP22.3■■□□□ 1.16
NPIPA1-203ENST00000472413 BCANQ96GW7 911 aa22.28■■□□□ 1.16
NPIPA1-203ENST00000472413 ANP32CO43423 234 aa22.23■■□□□ 1.15
NPIPA1-203ENST00000472413 NACADO15069 1562 aa22.21■■□□□ 1.15
NPIPA1-203ENST00000472413 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
NPIPA1-203ENST00000472413 NEFMP07197 916 aa22.15■■□□□ 1.14
NPIPA1-203ENST00000472413 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
NPIPA1-203ENST00000472413 STAG3Q9UJ98 1225 aa22.06■■□□□ 1.12
NPIPA1-203ENST00000472413 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
NPIPA1-203ENST00000472413 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
NPIPA1-203ENST00000472413 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
NPIPA1-203ENST00000472413 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
NPIPA1-203ENST00000472413 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
NPIPA1-203ENST00000472413 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
NPIPA1-203ENST00000472413 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
NPIPA1-203ENST00000472413 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
NPIPA1-203ENST00000472413 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
NPIPA1-203ENST00000472413 EEA1Q15075 1411 aa21.91■■□□□ 1.1
NPIPA1-203ENST00000472413 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
NPIPA1-203ENST00000472413 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
NPIPA1-203ENST00000472413 CLIP1P30622 1438 aa21.8■■□□□ 1.08
NPIPA1-203ENST00000472413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.084e-9■■□□□ 12.3
NPIPA1-203ENST00000472413 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
NPIPA1-203ENST00000472413 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
NPIPA1-203ENST00000472413 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
NPIPA1-203ENST00000472413 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
NPIPA1-203ENST00000472413 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
NPIPA1-203ENST00000472413 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
NPIPA1-203ENST00000472413 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
NPIPA1-203ENST00000472413 GTF3C3Q9Y5Q9 886 aa21.67■■□□□ 1.06
NPIPA1-203ENST00000472413 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
NPIPA1-203ENST00000472413 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
NPIPA1-203ENST00000472413 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
NPIPA1-203ENST00000472413 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
NPIPA1-203ENST00000472413 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
NPIPA1-203ENST00000472413 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
NPIPA1-203ENST00000472413 BCL11AQ9H165 835 aa21.5■■□□□ 1.03
NPIPA1-203ENST00000472413 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
NPIPA1-203ENST00000472413 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
NPIPA1-203ENST00000472413 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
NPIPA1-203ENST00000472413 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
NPIPA1-203ENST00000472413 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
NPIPA1-203ENST00000472413 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
NPIPA1-203ENST00000472413 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms