RNA–Protein interactions for RNA: ENST00000552296.6

PCBP2-222, Transcript of poly(rC) binding protein 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PCBP2, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-222ENST00000552296 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
PCBP2-222ENST00000552296 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
PCBP2-222ENST00000552296 ABCC9O60706 1549 aa20.67■□□□□ 0.9
PCBP2-222ENST00000552296 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
PCBP2-222ENST00000552296 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
PCBP2-222ENST00000552296 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
PCBP2-222ENST00000552296 NACADO15069 1562 aa19.51■□□□□ 0.71
PCBP2-222ENST00000552296 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
PCBP2-222ENST00000552296 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
PCBP2-222ENST00000552296 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
PCBP2-222ENST00000552296 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
PCBP2-222ENST00000552296 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCBP2-222ENST00000552296 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
PCBP2-222ENST00000552296 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
PCBP2-222ENST00000552296 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
PCBP2-222ENST00000552296 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
PCBP2-222ENST00000552296 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
PCBP2-222ENST00000552296 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
PCBP2-222ENST00000552296 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
PCBP2-222ENST00000552296 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
PCBP2-222ENST00000552296 NCAPD3P42695 1498 aa18.02■□□□□ 0.47
PCBP2-222ENST00000552296 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
PCBP2-222ENST00000552296 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
PCBP2-222ENST00000552296 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
PCBP2-222ENST00000552296 CUX2O14529 1486 aa17.91■□□□□ 0.46
PCBP2-222ENST00000552296 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
PCBP2-222ENST00000552296 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
PCBP2-222ENST00000552296 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
PCBP2-222ENST00000552296 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
PCBP2-222ENST00000552296 NESP48681 1621 aa17.77■□□□□ 0.43
PCBP2-222ENST00000552296 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
PCBP2-222ENST00000552296 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
PCBP2-222ENST00000552296 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
PCBP2-222ENST00000552296 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.42
PCBP2-222ENST00000552296 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
PCBP2-222ENST00000552296 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
PCBP2-222ENST00000552296 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
PCBP2-222ENST00000552296 WIZO95785 1651 aa17.45■□□□□ 0.38
PCBP2-222ENST00000552296 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
PCBP2-222ENST00000552296 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
PCBP2-222ENST00000552296 WDR62O43379 1518 aa17.37■□□□□ 0.37
PCBP2-222ENST00000552296 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
PCBP2-222ENST00000552296 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
PCBP2-222ENST00000552296 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
PCBP2-222ENST00000552296 CFTRP13569 1480 aa17.23■□□□□ 0.35
PCBP2-222ENST00000552296 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
PCBP2-222ENST00000552296 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
PCBP2-222ENST00000552296 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
PCBP2-222ENST00000552296 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
PCBP2-222ENST00000552296 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
PCBP2-222ENST00000552296 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
PCBP2-222ENST00000552296 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
PCBP2-222ENST00000552296 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
PCBP2-222ENST00000552296 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
PCBP2-222ENST00000552296 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
PCBP2-222ENST00000552296 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
PCBP2-222ENST00000552296 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
PCBP2-222ENST00000552296 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
PCBP2-222ENST00000552296 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
PCBP2-222ENST00000552296 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
PCBP2-222ENST00000552296 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
PCBP2-222ENST00000552296 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
PCBP2-222ENST00000552296 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
PCBP2-222ENST00000552296 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
PCBP2-222ENST00000552296 CHD1O14646 1710 aa16.79■□□□□ 0.28
PCBP2-222ENST00000552296 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
PCBP2-222ENST00000552296 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.273e-7■■■■■ 27.2
PCBP2-222ENST00000552296 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.26
PCBP2-222ENST00000552296 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
PCBP2-222ENST00000552296 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
PCBP2-222ENST00000552296 CUX1P39880 1505 aa16.59■□□□□ 0.25
PCBP2-222ENST00000552296 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
PCBP2-222ENST00000552296 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PCBP2-222ENST00000552296 SOGA1O94964 1423 aa16.58■□□□□ 0.25
PCBP2-222ENST00000552296 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
PCBP2-222ENST00000552296 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
PCBP2-222ENST00000552296 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
PCBP2-222ENST00000552296 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
PCBP2-222ENST00000552296 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
PCBP2-222ENST00000552296 FBLN2P98095 1184 aa16.49■□□□□ 0.23
PCBP2-222ENST00000552296 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
PCBP2-222ENST00000552296 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
PCBP2-222ENST00000552296 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
PCBP2-222ENST00000552296 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
PCBP2-222ENST00000552296 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
PCBP2-222ENST00000552296 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
PCBP2-222ENST00000552296 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
PCBP2-222ENST00000552296 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
PCBP2-222ENST00000552296 FOXD1Q16676 465 aa16.35■□□□□ 0.21
PCBP2-222ENST00000552296 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
PCBP2-222ENST00000552296 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
PCBP2-222ENST00000552296 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
PCBP2-222ENST00000552296 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
PCBP2-222ENST00000552296 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
PCBP2-222ENST00000552296 CEP170Q5SW79 1584 aa16.29■□□□□ 0.2
PCBP2-222ENST00000552296 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
PCBP2-222ENST00000552296 NUP160Q12769 1436 aa16.27■□□□□ 0.2
PCBP2-222ENST00000552296 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
PCBP2-222ENST00000552296 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
PCBP2-222ENST00000552296 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms