RNA–Protein interactions for RNA: ENST00000550520.6

PCBP2-217, Transcript of poly(rC) binding protein 2, humanhuman

TSL 3

Gene PCBP2, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-217ENST00000550520 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
PCBP2-217ENST00000550520 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
PCBP2-217ENST00000550520 ABCC9O60706 1549 aa23.13■■□□□ 1.29
PCBP2-217ENST00000550520 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
PCBP2-217ENST00000550520 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
PCBP2-217ENST00000550520 NACADO15069 1562 aa22.1■■□□□ 1.13
PCBP2-217ENST00000550520 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
PCBP2-217ENST00000550520 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
PCBP2-217ENST00000550520 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
PCBP2-217ENST00000550520 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
PCBP2-217ENST00000550520 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCBP2-217ENST00000550520 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
PCBP2-217ENST00000550520 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
PCBP2-217ENST00000550520 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
PCBP2-217ENST00000550520 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
PCBP2-217ENST00000550520 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
PCBP2-217ENST00000550520 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
PCBP2-217ENST00000550520 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
PCBP2-217ENST00000550520 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
PCBP2-217ENST00000550520 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
PCBP2-217ENST00000550520 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
PCBP2-217ENST00000550520 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
PCBP2-217ENST00000550520 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
PCBP2-217ENST00000550520 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
PCBP2-217ENST00000550520 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
PCBP2-217ENST00000550520 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
PCBP2-217ENST00000550520 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
PCBP2-217ENST00000550520 WIZO95785 1651 aa20.23■□□□□ 0.83
PCBP2-217ENST00000550520 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
PCBP2-217ENST00000550520 NESP48681 1621 aa20.01■□□□□ 0.79
PCBP2-217ENST00000550520 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
PCBP2-217ENST00000550520 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
PCBP2-217ENST00000550520 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
PCBP2-217ENST00000550520 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
PCBP2-217ENST00000550520 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
PCBP2-217ENST00000550520 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
PCBP2-217ENST00000550520 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
PCBP2-217ENST00000550520 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
PCBP2-217ENST00000550520 CFTRP13569 1480 aa19.7■□□□□ 0.74
PCBP2-217ENST00000550520 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
PCBP2-217ENST00000550520 CUX2O14529 1486 aa19.64■□□□□ 0.73
PCBP2-217ENST00000550520 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
PCBP2-217ENST00000550520 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
PCBP2-217ENST00000550520 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
PCBP2-217ENST00000550520 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
PCBP2-217ENST00000550520 WDR62O43379 1518 aa19.5■□□□□ 0.71
PCBP2-217ENST00000550520 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
PCBP2-217ENST00000550520 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
PCBP2-217ENST00000550520 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
PCBP2-217ENST00000550520 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
PCBP2-217ENST00000550520 CUX1P39880 1505 aa19.19■□□□□ 0.66
PCBP2-217ENST00000550520 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
PCBP2-217ENST00000550520 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
PCBP2-217ENST00000550520 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
PCBP2-217ENST00000550520 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
PCBP2-217ENST00000550520 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
PCBP2-217ENST00000550520 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
PCBP2-217ENST00000550520 SOGA1O94964 1423 aa19.07■□□□□ 0.64
PCBP2-217ENST00000550520 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
PCBP2-217ENST00000550520 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
PCBP2-217ENST00000550520 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
PCBP2-217ENST00000550520 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.645e-7■■■■□ 22.3
PCBP2-217ENST00000550520 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
PCBP2-217ENST00000550520 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
PCBP2-217ENST00000550520 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
PCBP2-217ENST00000550520 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
PCBP2-217ENST00000550520 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
PCBP2-217ENST00000550520 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
PCBP2-217ENST00000550520 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
PCBP2-217ENST00000550520 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
PCBP2-217ENST00000550520 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
PCBP2-217ENST00000550520 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
PCBP2-217ENST00000550520 FBLN2P98095 1184 aa18.83■□□□□ 0.6
PCBP2-217ENST00000550520 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
PCBP2-217ENST00000550520 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
PCBP2-217ENST00000550520 CHD1O14646 1710 aa18.82■□□□□ 0.6
PCBP2-217ENST00000550520 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
PCBP2-217ENST00000550520 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
PCBP2-217ENST00000550520 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
PCBP2-217ENST00000550520 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
PCBP2-217ENST00000550520 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
PCBP2-217ENST00000550520 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
PCBP2-217ENST00000550520 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
PCBP2-217ENST00000550520 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
PCBP2-217ENST00000550520 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
PCBP2-217ENST00000550520 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
PCBP2-217ENST00000550520 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
PCBP2-217ENST00000550520 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
PCBP2-217ENST00000550520 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
PCBP2-217ENST00000550520 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
PCBP2-217ENST00000550520 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
PCBP2-217ENST00000550520 IGF1RP08069 1367 aa18.54■□□□□ 0.56
PCBP2-217ENST00000550520 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
PCBP2-217ENST00000550520 CUL7Q14999 1698 aa18.5■□□□□ 0.55
PCBP2-217ENST00000550520 NUP160Q12769 1436 aa18.5■□□□□ 0.55
PCBP2-217ENST00000550520 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
PCBP2-217ENST00000550520 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PCBP2-217ENST00000550520 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
PCBP2-217ENST00000550520 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
PCBP2-217ENST00000550520 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms