RNA–Protein interactions for RNA: ENST00000428808.5

BRD8-208, Transcript of bromodomain containing 8, humanhuman

TSL 4

Gene BRD8, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-208ENST00000428808 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
BRD8-208ENST00000428808 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
BRD8-208ENST00000428808 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
BRD8-208ENST00000428808 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
BRD8-208ENST00000428808 FOXD1Q16676 465 aa12.53□□□□□ -0.4
BRD8-208ENST00000428808 NISCHQ9Y2I1 1504 aa12.38□□□□□ -0.43
BRD8-208ENST00000428808 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
BRD8-208ENST00000428808 ABCC9O60706 1549 aa12.27□□□□□ -0.45
BRD8-208ENST00000428808 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
BRD8-208ENST00000428808 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
BRD8-208ENST00000428808 MSH5O43196 834 aa11.67□□□□□ -0.54
BRD8-208ENST00000428808 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
BRD8-208ENST00000428808 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
BRD8-208ENST00000428808 ADRA2BP18089 450 aa11.45□□□□□ -0.58
BRD8-208ENST00000428808 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
BRD8-208ENST00000428808 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
BRD8-208ENST00000428808 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
BRD8-208ENST00000428808 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
BRD8-208ENST00000428808 CECR2Q9BXF3 1484 aa11.08□□□□□ -0.64
BRD8-208ENST00000428808 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
BRD8-208ENST00000428808 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
BRD8-208ENST00000428808 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
BRD8-208ENST00000428808 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
BRD8-208ENST00000428808 NACADO15069 1562 aa10.92□□□□□ -0.66
BRD8-208ENST00000428808 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
BRD8-208ENST00000428808 CUX2O14529 1486 aa10.75□□□□□ -0.69
BRD8-208ENST00000428808 EIF4G1Q04637 1599 aaKnown RBP10.72□□□□□ -0.69
BRD8-208ENST00000428808 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
BRD8-208ENST00000428808 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
BRD8-208ENST00000428808 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
BRD8-208ENST00000428808 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
BRD8-208ENST00000428808 MYO15BQ96JP2 1530 aa10.47□□□□□ -0.73
BRD8-208ENST00000428808 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
BRD8-208ENST00000428808 NESP48681 1621 aa10.32□□□□□ -0.76
BRD8-208ENST00000428808 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
BRD8-208ENST00000428808 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
BRD8-208ENST00000428808 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
BRD8-208ENST00000428808 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
BRD8-208ENST00000428808 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
BRD8-208ENST00000428808 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
BRD8-208ENST00000428808 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
BRD8-208ENST00000428808 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
BRD8-208ENST00000428808 NCAPD3P42695 1498 aa10.16□□□□□ -0.78
BRD8-208ENST00000428808 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.78
BRD8-208ENST00000428808 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
BRD8-208ENST00000428808 RIMBP3CA6NJZ7 1639 aa10.12□□□□□ -0.79
BRD8-208ENST00000428808 RIMBP3BA6NNM3 1639 aa10.12□□□□□ -0.79
BRD8-208ENST00000428808 RIMBP3Q9UFD9 1639 aa10.12□□□□□ -0.79
BRD8-208ENST00000428808 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
BRD8-208ENST00000428808 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
BRD8-208ENST00000428808 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
BRD8-208ENST00000428808 ATAD2BQ9ULI0 1458 aa10.04□□□□□ -0.8
BRD8-208ENST00000428808 KIF21AQ7Z4S6 1674 aa10.03□□□□□ -0.8
BRD8-208ENST00000428808 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
BRD8-208ENST00000428808 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
BRD8-208ENST00000428808 ARHGEF11O15085 1522 aa10.02□□□□□ -0.8
BRD8-208ENST00000428808 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
BRD8-208ENST00000428808 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
BRD8-208ENST00000428808 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
BRD8-208ENST00000428808 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
BRD8-208ENST00000428808 WDR62O43379 1518 aa9.92□□□□□ -0.82
BRD8-208ENST00000428808 ARAP1Q96P48 1450 aa9.9□□□□□ -0.83
BRD8-208ENST00000428808 BAZ1BQ9UIG0 1483 aaKnown RBP9.89□□□□□ -0.83
BRD8-208ENST00000428808 CADPSQ9ULU8 1353 aa9.85□□□□□ -0.83
BRD8-208ENST00000428808 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
BRD8-208ENST00000428808 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
BRD8-208ENST00000428808 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
BRD8-208ENST00000428808 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
BRD8-208ENST00000428808 SMARCA4P51532 1647 aa9.78□□□□□ -0.84
BRD8-208ENST00000428808 FBLN2P98095 1184 aa9.76□□□□□ -0.85
BRD8-208ENST00000428808 KDM4FA0A1W2PPD8 638 aa9.75□□□□□ -0.85
BRD8-208ENST00000428808 ZNF608Q9ULD9 1512 aaPredicted RBP9.74□□□□□ -0.85
BRD8-208ENST00000428808 FANCD2Q9BXW9 1451 aa9.73□□□□□ -0.85
BRD8-208ENST00000428808 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.86
BRD8-208ENST00000428808 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
BRD8-208ENST00000428808 PEG3Q9GZU2 1588 aa9.63□□□□□ -0.87
BRD8-208ENST00000428808 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
BRD8-208ENST00000428808 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
BRD8-208ENST00000428808 IFT140Q96RY7 1462 aa9.6□□□□□ -0.87
BRD8-208ENST00000428808 CHD1O14646 1710 aa9.59□□□□□ -0.87
BRD8-208ENST00000428808 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.879e-7■■■■□ 20
BRD8-208ENST00000428808 SOCS7O14512 581 aa9.58□□□□□ -0.88
BRD8-208ENST00000428808 ILDR2Q71H61 639 aa9.58□□□□□ -0.88
BRD8-208ENST00000428808 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
BRD8-208ENST00000428808 EIF4G3O43432 1585 aaKnown RBP9.54□□□□□ -0.88
BRD8-208ENST00000428808 CFTRP13569 1480 aa9.54□□□□□ -0.88
BRD8-208ENST00000428808 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
BRD8-208ENST00000428808 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
BRD8-208ENST00000428808 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
BRD8-208ENST00000428808 ERCC6L2Q5T890 1561 aa9.49□□□□□ -0.89
BRD8-208ENST00000428808 HECW2Q9P2P5 1572 aa9.49□□□□□ -0.89
BRD8-208ENST00000428808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.896e-8■■■■□ 20
BRD8-208ENST00000428808 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.9
BRD8-208ENST00000428808 TOPBP1Q92547 1522 aa9.45□□□□□ -0.9
BRD8-208ENST00000428808 TDRD9Q8NDG6 1382 aaKnown RBP9.44□□□□□ -0.9
BRD8-208ENST00000428808 DISP3Q9P2K9 1392 aa9.44□□□□□ -0.9
BRD8-208ENST00000428808 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
BRD8-208ENST00000428808 NPM3O75607 178 aaKnown RBP9.43□□□□□ -0.9
BRD8-208ENST00000428808 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
BRD8-208ENST00000428808 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms