RNA–Protein interactions for RNA: ENST00000591659.5

CIRBP-234, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-234ENST00000591659 NISCHQ9Y2I1 1504 aa50.88■■■■■ 5.74
CIRBP-234ENST00000591659 CCDC180Q9P1Z9 1646 aa45.41■■■■■ 4.86
CIRBP-234ENST00000591659 ABCC9O60706 1549 aa44.91■■■■■ 4.78
CIRBP-234ENST00000591659 RB1CC1Q8TDY2 1594 aa42.96■■■■■ 4.47
CIRBP-234ENST00000591659 NACADO15069 1562 aa42.8■■■■■ 4.44
CIRBP-234ENST00000591659 DCAF8L2P0C7V8 631 aa42.67■■■■■ 4.42
CIRBP-234ENST00000591659 MYO15BQ96JP2 1530 aa42.41■■■■■ 4.38
CIRBP-234ENST00000591659 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
CIRBP-234ENST00000591659 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
CIRBP-234ENST00000591659 UNC13AQ9UPW8 1703 aa41.97■■■■■ 4.31
CIRBP-234ENST00000591659 PABPN1Q86U42 306 aaKnown RBP eCLIP41.89■■■■■ 4.3
CIRBP-234ENST00000591659 BICRAQ9NZM4 1560 aa41.72■■■■■ 4.27
CIRBP-234ENST00000591659 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
CIRBP-234ENST00000591659 SCRIBQ14160 1630 aa41.43■■■■■ 4.22
CIRBP-234ENST00000591659 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
CIRBP-234ENST00000591659 EIF4G1Q04637 1599 aaKnown RBP40.65■■■■■ 4.1
CIRBP-234ENST00000591659 CC2D2AQ9P2K1 1620 aa40.59■■■■■ 4.09
CIRBP-234ENST00000591659 CECR2Q9BXF3 1484 aa40.39■■■■■ 4.06
CIRBP-234ENST00000591659 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
CIRBP-234ENST00000591659 NCAPD3P42695 1498 aa39.52■■■■□ 3.92
CIRBP-234ENST00000591659 ATAD2BQ9ULI0 1458 aa39.49■■■■□ 3.91
CIRBP-234ENST00000591659 BAZ1AQ9NRL2 1556 aaPredicted RBP39.46■■■■□ 3.91
CIRBP-234ENST00000591659 SMARCA2P51531 1590 aa39.38■■■■□ 3.9
CIRBP-234ENST00000591659 HMGXB3Q12766 1538 aa39.29■■■■□ 3.88
CIRBP-234ENST00000591659 MROH2BQ7Z745 1585 aa39.23■■■■□ 3.87
CIRBP-234ENST00000591659 PEG3Q9GZU2 1588 aa39.2■■■■□ 3.87
CIRBP-234ENST00000591659 BAZ1BQ9UIG0 1483 aaKnown RBP39.12■■■■□ 3.85
CIRBP-234ENST00000591659 WIZO95785 1651 aa38.76■■■■□ 3.8
CIRBP-234ENST00000591659 NESP48681 1621 aa38.74■■■■□ 3.79
CIRBP-234ENST00000591659 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
CIRBP-234ENST00000591659 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
CIRBP-234ENST00000591659 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
CIRBP-234ENST00000591659 CUX2O14529 1486 aa38.47■■■■□ 3.75
CIRBP-234ENST00000591659 CADPSQ9ULU8 1353 aa38.34■■■■□ 3.73
CIRBP-234ENST00000591659 TOP2AP11388 1531 aaKnown RBP38.33■■■■□ 3.73
CIRBP-234ENST00000591659 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
CIRBP-234ENST00000591659 THOC2Q8NI27 1593 aaKnown RBP38.24■■■■□ 3.71
CIRBP-234ENST00000591659 KIF21AQ7Z4S6 1674 aa38.23■■■■□ 3.71
CIRBP-234ENST00000591659 CFTRP13569 1480 aa38.03■■■■□ 3.68
CIRBP-234ENST00000591659 MRC2Q9UBG0 1479 aa37.95■■■■□ 3.67
CIRBP-234ENST00000591659 FANCD2Q9BXW9 1451 aa37.91■■■■□ 3.66
CIRBP-234ENST00000591659 CEP164Q9UPV0 1460 aa37.9■■■■□ 3.66
CIRBP-234ENST00000591659 CCDC88BA6NC98 1476 aa37.88■■■■□ 3.65
CIRBP-234ENST00000591659 WDR62O43379 1518 aa37.85■■■■□ 3.65
CIRBP-234ENST00000591659 DNAJC5Q9H3Z4 198 aa37.83■■■■□ 3.65
CIRBP-234ENST00000591659 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
CIRBP-234ENST00000591659 URB2Q14146 1524 aaKnown RBP37.58■■■■□ 3.61
CIRBP-234ENST00000591659 SUPT5HO00267 1087 aaKnown RBP37.26■■■■□ 3.56
CIRBP-234ENST00000591659 TOPBP1Q92547 1522 aa37.26■■■■□ 3.55
CIRBP-234ENST00000591659 ABCC8Q09428 1581 aa37.18■■■■□ 3.54
CIRBP-234ENST00000591659 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
CIRBP-234ENST00000591659 IFT140Q96RY7 1462 aa37.13■■■■□ 3.53
CIRBP-234ENST00000591659 ZNF608Q9ULD9 1512 aaPredicted RBP37.03■■■■□ 3.52
CIRBP-234ENST00000591659 POLA1P09884 1462 aaPredicted RBP36.93■■■■□ 3.5
CIRBP-234ENST00000591659 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.5
CIRBP-234ENST00000591659 EIF4G3O43432 1585 aaKnown RBP36.85■■■■□ 3.49
CIRBP-234ENST00000591659 CUX1P39880 1505 aa36.82■■■■□ 3.48
CIRBP-234ENST00000591659 OSCARQ8IYS5 282 aa36.78■■■■□ 3.48
CIRBP-234ENST00000591659 RAD54L2Q9Y4B4 1467 aa36.77■■■■□ 3.48
CIRBP-234ENST00000591659 FGD5Q6ZNL6 1462 aa36.76■■■■□ 3.48
CIRBP-234ENST00000591659 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.471e-9■■■■■ 40.3
CIRBP-234ENST00000591659 SOGA1O94964 1423 aa36.74■■■■□ 3.47
CIRBP-234ENST00000591659 TDRD9Q8NDG6 1382 aaKnown RBP36.61■■■■□ 3.45
CIRBP-234ENST00000591659 WDR97A6NE52 1622 aa36.53■■■■□ 3.44
CIRBP-234ENST00000591659 CHD1O14646 1710 aa36.44■■■■□ 3.42
CIRBP-234ENST00000591659 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.421e-6■■■■■ 58.5
CIRBP-234ENST00000591659 SNAPC4Q5SXM2 1469 aa36.4■■■■□ 3.42
CIRBP-234ENST00000591659 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
CIRBP-234ENST00000591659 FBLN2P98095 1184 aa36.37■■■■□ 3.41
CIRBP-234ENST00000591659 ABCA10Q8WWZ4 1543 aa36.37■■■■□ 3.41
CIRBP-234ENST00000591659 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
CIRBP-234ENST00000591659 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
CIRBP-234ENST00000591659 BIVM-ERCC5R4GMW8 1640 aa36.36■■■■□ 3.41
CIRBP-234ENST00000591659 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
CIRBP-234ENST00000591659 MAGI1Q96QZ7 1491 aaPredicted RBP36.31■■■■□ 3.4
CIRBP-234ENST00000591659 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
CIRBP-234ENST00000591659 RIMBP3CA6NJZ7 1639 aa36.27■■■■□ 3.4
CIRBP-234ENST00000591659 RIMBP3BA6NNM3 1639 aa36.27■■■■□ 3.4
CIRBP-234ENST00000591659 ABCA5Q8WWZ7 1642 aa36.27■■■■□ 3.4
CIRBP-234ENST00000591659 RIMBP3Q9UFD9 1639 aa36.27■■■■□ 3.4
CIRBP-234ENST00000591659 PBRM1Q86U86 1689 aa36.24■■■■□ 3.39
CIRBP-234ENST00000591659 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
CIRBP-234ENST00000591659 SYNJ2O15056 1496 aa36.19■■■■□ 3.38
CIRBP-234ENST00000591659 CHMP7Q8WUX9 453 aaPredicted RBP36.19■■■■□ 3.38
CIRBP-234ENST00000591659 CLASP1Q7Z460 1538 aa36.08■■■■□ 3.37
CIRBP-234ENST00000591659 ADAMTS12P58397 1594 aa35.97■■■■□ 3.35
CIRBP-234ENST00000591659 ERICH3Q5RHP9 1530 aa35.92■■■■□ 3.34
CIRBP-234ENST00000591659 ARAP1Q96P48 1450 aa35.92■■■■□ 3.34
CIRBP-234ENST00000591659 GRIN2AQ12879 1464 aa35.91■■■■□ 3.34
CIRBP-234ENST00000591659 CYB5RLQ6IPT4 315 aa35.89■■■■□ 3.34
CIRBP-234ENST00000591659 FHAD1B1AJZ9 1412 aa35.87■■■■□ 3.33
CIRBP-234ENST00000591659 NUP160Q12769 1436 aa35.78■■■■□ 3.32
CIRBP-234ENST00000591659 CEP170Q5SW79 1584 aa35.76■■■■□ 3.32
CIRBP-234ENST00000591659 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
CIRBP-234ENST00000591659 IGF1RP08069 1367 aa35.59■■■■□ 3.29
CIRBP-234ENST00000591659 ERCC6L2Q5T890 1561 aa35.56■■■■□ 3.28
CIRBP-234ENST00000591659 SHROOM2Q13796 1616 aa35.54■■■■□ 3.28
CIRBP-234ENST00000591659 CUL7Q14999 1698 aa35.49■■■■□ 3.27
CIRBP-234ENST00000591659 RUSC2Q8N2Y8 1516 aa35.46■■■■□ 3.27
CIRBP-234ENST00000591659 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms