Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 SPCS2P3-201ENST00000500401 656 ntBASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 MIR6765-201ENST00000614092 87 ntBASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 AL359504.2-201ENST00000605506 1601 ntBASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G3Q9Y6M4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G3Q9Y6M4 WHAMMP3-201ENST00000611636 1609 ntBASIC24.11■■□□□ 1.45
CSNK1G3Q9Y6M4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.11■■□□□ 1.45
CSNK1G3Q9Y6M4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.11■■□□□ 1.45
CSNK1G3Q9Y6M4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G3Q9Y6M4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G3Q9Y6M4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G3Q9Y6M4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G3Q9Y6M4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.1■■□□□ 1.45
CSNK1G3Q9Y6M4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G3Q9Y6M4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 AC018755.3-202ENST00000596210 929 ntBASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 BHLHE23-202ENST00000612929 1109 ntBASIC24.09■■□□□ 1.45
CSNK1G3Q9Y6M4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CSNK1G3Q9Y6M4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.08■■□□□ 1.44
CSNK1G3Q9Y6M4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G3Q9Y6M4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.06■■□□□ 1.44
CSNK1G3Q9Y6M4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.05■■□□□ 1.44
CSNK1G3Q9Y6M4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
CSNK1G3Q9Y6M4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.05■■□□□ 1.44
CSNK1G3Q9Y6M4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CSNK1G3Q9Y6M4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSNK1G3Q9Y6M4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G3Q9Y6M4 AC139795.1-202ENST00000500444 432 ntBASIC24.04■■□□□ 1.44
CSNK1G3Q9Y6M4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.03■■□□□ 1.44
CSNK1G3Q9Y6M4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSNK1G3Q9Y6M4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CSNK1G3Q9Y6M4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CSNK1G3Q9Y6M4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.02■■□□□ 1.44
CSNK1G3Q9Y6M4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 AC010980.1-201ENST00000587192 1142 ntBASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G3Q9Y6M4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24■■□□□ 1.43
CSNK1G3Q9Y6M4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24■■□□□ 1.43
CSNK1G3Q9Y6M4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24■■□□□ 1.43
CSNK1G3Q9Y6M4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24■■□□□ 1.43
CSNK1G3Q9Y6M4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CSNK1G3Q9Y6M4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSNK1G3Q9Y6M4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSNK1G3Q9Y6M4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CSNK1G3Q9Y6M4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CSNK1G3Q9Y6M4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 AL035685.1-201ENST00000636663 812 ntBASIC23.97■■□□□ 1.43
CSNK1G3Q9Y6M4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSNK1G3Q9Y6M4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSNK1G3Q9Y6M4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSNK1G3Q9Y6M4 AL451085.2-201ENST00000605085 799 ntBASIC23.96■■□□□ 1.43
CSNK1G3Q9Y6M4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
CSNK1G3Q9Y6M4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CSNK1G3Q9Y6M4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 YBX1P4-201ENST00000392794 808 ntBASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CSNK1G3Q9Y6M4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.93■■□□□ 1.42
CSNK1G3Q9Y6M4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms